Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00739 ATGCCACAAGAGAGCTCCCAAAACTCATTTTTCACATCTCCTTCAAAGAGAGGATTGAAGGGTTTGGTGTCCATCAACAAGGAGGCTGCATGCACTGCTGCCACAGAGGAGAGTTTCAATGATAATGAATTGGCTCAGAGGAAGGCAGAGGAAGCAGCTTCGAGAAGATACAAAGCAACAGAATGGCTACGCCAAATGGACCACGTTGCATCATCGTCACTCTCTCCAACACCCTCCGAGGAAGAGTTTTGCCTTGCACTACGCAATGGCCTCATTCTCTGCAATGTCCTTAACAAAGTCAACCCCGGTGCTGTCCTTAAGGTAGTGGACAATCCTGGGCTTGCTGTTCAGTCCGCAGAGGGGGCGGCCCACTCCGCAATTCAGTATTTTGAGAACATGAGGAACTTTTTGGAGGCTGTTAAGGATATGCAACTTCTCACATTTGAAGCATCTGATTTGGAGAAGGGAGGTTCATCAAATAAAGTTGTGGACTGCATTCTATGTTTGAAGGGGTTTTATGAATGGAAGTTATCTGGTGGGGTTGGGGTGTGGAGGTATGGTGGAACTGTGAGGATTACTTCCTTTCCAAAGAAGTCTCCTTCCTCCATAGTTGGCAGTGAAAGTGCTGATGAATCACTGGATGAGTCAGAATCATCACAGTATGAACAACTGCTAGAATTTCTTCAATTATCTGAAGACTTCTTGATTGAAGAAACCAGAACTGCAAATGCTCTTGCTTTCCTTTATGATCACTTTGGACTCAGACTTCTTCAGGCTTACCTTAGAGAGGCCAATGGGATTGAAGATCTGCCTCTGAATGCAATGGTAATTGATACCTTACTCAGCAAGGTAGTCAAGGATTTCTCATCTTTGCTTGTTTCTCAAGGCAATCAGCTTGGACTTTTCCTGAAGAAAATACTAAAAGGTGATATTGGTTGTCTCTCAAAGAGAGAGTTCATAGAAGCCATCTCACTATATCTTGACCAAAGAAGTAGTTTGGCATCAAATGATTTCTCCAAATTCTGCAATTGTGGTGGAAAACGTGATAGTATTCGACAAAATGCCAATTATTCTGCAAAATATGCTGAAGTAATCAACACTCAACAGAAACAACTTGAGGGTATGAAGTACTTTTTTGAAGAGACAAAATTGGAGGTCAGACAAATCCAATCCGAGTGGGAAGAAGAATTTAGTAGGCTAGAGGATCATATCAAAAGCCTTGAAGTGGCCTCCTCTTCCTACCACAAAGTTTTGGAGGAGAACCGCCTTCTTTACAATCAAGTACAAGACCTCAAAGGAGCCATTAGGGTCTACTGTAGAGTGAGGCCATTCTTACCGGGACAATCAAATGGACCGTCTACAGTAGACTATATTGGAGAAAATGGAGATATGATGATCGTAAATCCCCTTAAACATGGAAAAGATGCTAGAAGGGTTTTTTCATTCAATAAGGTGTTTGGAACAAGTGTAACACAAGAACAAATTTATGTTGACACTCAACCATTGATCAGATCTGTTTTAGATGGTTACAATGCATGCATCTTTGCATACGGTCAGACTGGCTCAGGGAAAACATACACAATGAGTGGCCCTGATCTGACAACTGAAGAGACATGGGGTGTAAACTATAGGGCTTTGCGTGACTTATTTTACATATCAAAGGAAAGGGACAATTCCTTAACAAGATATACATTAGACATACGAAACACTTCTCAACTGAATGGCATCAATGTGCCTGATGCATTTTTAGTTCCGGTCACTTGTACTCAAGATGTTCTAGACTTGATGAGAATTGGTCAGAAGAACCGTGCCGTGGGTGCTACAGCTCTAAATGAGAGAAGCAGTCGTTCTCATAGTGTTTTGACTGTTCATGTTAGAGGAAGGGAGTTAGTTTCCAACTCCATTCTTAGAGGTTGTCTCCATCTTGTGGATTTGGCTGGAAGTGAGAGGGTTGACAAATCTGAGGCTGTTGGTGAGAGACTAAAGGAAGCTCAACATATAAACAGATCACTTTCTGCACTTGGGGATGTTATCTCTGCCTTGGCACAAAAGAGTCCACATATCCCTTATAGAAATAGCAAGCTCACACAAGTGTTACAAGATTCTTTAGGTAACAGTGGACATGCAAAAACTTTGATGTTTGTTCATATAAATCCTGAACTTAATGCTATTGGGGAGACAATTAGCACACTCAAGTTTGCTGAGAGGGTTTCGTCAATTGAACTTGGGGCTGCTCAATCTAATAAAGAAACCGGTGAAATCCGAGAACTAAAGGACGAGATATCAAGTCTCAAATTAGCATTGGAGAAGAAGGAAGCAGAATTGGAGCAATGGAGGACTGGGAATGCTCGAAATGCCATTGATTCTCAAAAACCAAGAGCTGTTTCACCTTTTCAATTACCAAAATATGGTACCAGTGGCAACATGAAGCATGAAACTGGTCAAAGACTCATGGATGATAGAAGCATTGAGTCTAGAAGTTGCTCTTCTGGTAAGCAAAGAAGGTCAAGGTTTCCCTCAGCATTTATAGACAAGGACTCCATGCCAAAAATGTCTCTTCTGACTGAAGAAAAATTAGTGAGCTCAGGGAAGGGAAGATCACCATCCCCTCCAGTGAGAAGATCACTATCCAATGATAGAGGGACAGTCATTAAAAGCAAGGTCAAAAATGAAACATCAGACAACCAACCAATATTAAAGCATCCATTTCCAGCTAGAGTACCAGCTAACAAATCCCTTGCCACAATGCCAGTGGCTGCATCCACTGACAACAACACAAGAATGTATGTGAATTCACAAGAGCCAGTAAAGCAGGAAAACATTTCTGAAACACTCTTCAACCTCCAGAAGGTCAACTATAAGAAAGTACATCAAGAACATGAAGAGGAACAATTCAAGCAAGCACTTAGTGCAGTAAGACAAGGTGGTATTAGAAAAAGCAAGGTTGAGAGTAAGGCTAAAGCCAAGCATCCTCAACTATCACCCTTTAAGATTCAAAAGCCTGATTTGATCCCAACATTTATTCCTGACATGGATTTTGCTGGTGAAATGACTGTGGAGACACCTCCAAAGAATAATTATTCTGAGGCTGAAAATGATCTTAGATTTATGGAGTCTGCTGTGCATGGTGCTTTAAGTCTCAAAAAAATACGTCAGAACTTTGCAAGGAATTTTCAGAACCTTGAATCAAGAGGAATAGTGCAAACAGGAGAGCCTTTATTGGTTAGCAAAGTTGAAAACAAACTTTTGAATGGTTCGGGTAGCAATCCTAAAGAAGGAAGCAATGCATCCACGCCTGAATTTAGAAGGAGCCGATCTACCCCACGTGGAAAGTTTTTTGGTTTATCTTGA 3351 0.4142 MPQESSQNSFFTSPSKRGLKGLVSINKEAACTAATEESFNDNELAQRKAEEAASRRYKATEWLRQMDHVASSSLSPTPSEEEFCLALRNGLILCNVLNKVNPGAVLKVVDNPGLAVQSAEGAAHSAIQYFENMRNFLEAVKDMQLLTFEASDLEKGGSSNKVVDCILCLKGFYEWKLSGGVGVWRYGGTVRITSFPKKSPSSIVGSESADESLDESESSQYEQLLEFLQLSEDFLIEETRTANALAFLYDHFGLRLLQAYLREANGIEDLPLNAMVIDTLLSKVVKDFSSLLVSQGNQLGLFLKKILKGDIGCLSKREFIEAISLYLDQRSSLASNDFSKFCNCGGKRDSIRQNANYSAKYAEVINTQQKQLEGMKYFFEETKLEVRQIQSEWEEEFSRLEDHIKSLEVASSSYHKVLEENRLLYNQVQDLKGAIRVYCRVRPFLPGQSNGPSTVDYIGENGDMMIVNPLKHGKDARRVFSFNKVFGTSVTQEQIYVDTQPLIRSVLDGYNACIFAYGQTGSGKTYTMSGPDLTTEETWGVNYRALRDLFYISKERDNSLTRYTLDIRNTSQLNGINVPDAFLVPVTCTQDVLDLMRIGQKNRAVGATALNERSSRSHSVLTVHVRGRELVSNSILRGCLHLVDLAGSERVDKSEAVGERLKEAQHINRSLSALGDVISALAQKSPHIPYRNSKLTQVLQDSLGNSGHAKTLMFVHINPELNAIGETISTLKFAERVSSIELGAAQSNKETGEIRELKDEISSLKLALEKKEAELEQWRTGNARNAIDSQKPRAVSPFQLPKYGTSGNMKHETGQRLMDDRSIESRSCSSGKQRRSRFPSAFIDKDSMPKMSLLTEEKLVSSGKGRSPSPPVRRSLSNDRGTVIKSKVKNETSDNQPILKHPFPARVPANKSLATMPVAASTDNNTRMYVNSQEPVKQENISETLFNLQKVNYKKVHQEHEEEQFKQALSAVRQGGIRKSKVESKAKAKHPQLSPFKIQKPDLIPTFIPDMDFAGEMTVETPPKNNYSEAENDLRFMESAVHGALSLKKIRQNFARNFQNLESRGIVQTGEPLLVSKVENKLLNGSGSNPKEGSNASTPEFRRSRSTPRGKFFGLS 1116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00739 1116 SUPERFAMILY Calponin-homology domain, CH-domain 47 201 IPR036872 -
Pumo1g00739 1116 MobiDBLite consensus disorder prediction 797 882 - -
Pumo1g00739 1116 Pfam Kinesin motor domain 562 740 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo1g00739 1116 PRINTS Kinesin heavy chain signature 509 530 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo1g00739 1116 PRINTS Kinesin heavy chain signature 608 625 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo1g00739 1116 PRINTS Kinesin heavy chain signature 688 709 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo1g00739 1116 PRINTS Kinesin heavy chain signature 639 657 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo1g00739 1116 FunFam Kinesin-related protein3 577 782 - -
Pumo1g00739 1116 Gene3D Kinesin motor domain 421 561 IPR036961 -
Pumo1g00739 1116 SMART ch_5 55 172 IPR001715 GO:0005515
Pumo1g00739 1116 Gene3D Kinesin motor domain 562 781 IPR036961 -
Pumo1g00739 1116 MobiDBLite consensus disorder prediction 813 831 - -
Pumo1g00739 1116 SMART kinesin_4 432 748 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo1g00739 1116 Pfam Calponin homology (CH) domain 54 174 IPR001715 GO:0005515
Pumo1g00739 1116 Coils Coil 390 410 - -
Pumo1g00739 1116 FunFam kinesin-like protein KIN-14F 45 174 - -
Pumo1g00739 1116 Coils Coil 747 781 - -
Pumo1g00739 1116 ProSiteProfiles Calponin homology (CH) domain profile. 53 174 IPR001715 GO:0005515
Pumo1g00739 1116 CDD CH_AtKIN14-like 55 170 - -
Pumo1g00739 1116 Gene3D - 45 173 IPR036872 -
Pumo1g00739 1116 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 435 778 IPR027417 -
Pumo1g00739 1116 ProSiteProfiles Kinesin motor domain profile. 434 740 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo1g00739 1116 MobiDBLite consensus disorder prediction 1082 1116 - -
Pumo1g00739 1116 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein with CH (Calponin Homology) domain 376 576 - -
Pumo1g00739 1116 MobiDBLite consensus disorder prediction 1082 1103 - -
Pumo1g00739 1116 PANTHER KINESIN-LIKE PROTEIN KLP-3 60 889 IPR027640 GO:0003777|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00739 Pumo-Chr1 11211070 11222406 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00739 425 740 Calmodulin-binding Proteins AT5G65930 40.922 1.86e-64 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00739 K10406 - gmx:100793458 2005.72