Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00735 ATGAGCGATTCTGCATACAGAGTCGAAACCACACCACGCCTTGCTCAATGGAGAATCGAAAACTTGTCTTCCTGCACTTACCGAAAATCCGATCCTTTCAAGATTGGAAAGTGGAATTGGCATTTGTCGGTGGAGAAGAACAGGGTTTTGTTTGTTAAATTATTCCCAGAAATATCCAATCTTACGAGAGACAACCCCCCAATTGCATCTTTCATCATTCGGGTGGTTAGTTCTGTTGGAGATCGCAAGGCCATCACACATCCAGAAATAAAGGACAAAGTGTTAAAGAACAACGAAGATTTTGTTTGGGCAATTGAGGTTCCACTAACTGGAAAATTCATTATTGACGTTGAGTTTCTTGACTTGAAGACCGCATCCCCAAACGGTGGAGAACCTTGTTCCATCTGGGCAGAAGGATTTACTCAGCAAAGATCAAATGCAAAAGCCATAGAGTCTCTTGGTAGAATGCTAACAGAAGGCATCCACACAGACATCACCATCAATGCTTCTGATGGAAGTATAGGAGCTCATCGAGCTGTTCTTGCTGCCAGATCACCTGTCTTCCGCAGCATGTTCTCACATAATCTTCAGGAGAAAGAGTTGTCAACCATAAACATCTCAGACATGTCACTTGAATCATGCCAGGCTTTTCTCAATTATCTTTATGGGATCATCAAACATGAAGAGTTTCTGACTCATAGGCTGGCCCTTCTGCATGCGGCCGACAAGTATGACATTTCTGACTTGAGAGATGTATGCCATGAGAGTCTTCTAGAAGATATTGACACAAAAAATGTACTTGATAGGCTCCAAAATGCATCTCTATATCAGTTGATGAAACTGAAGATGAGTTGCATCCGATATCTTGTGAAGTTTGGTAAAATATATGAAATTCGTGATGATTTCAATACCTTCCTGCAAAATGCAGATAGGGATCTGATTGCTGAAGTCTTCCATGAAGTTCTTGATGCTTGGAAAGGATTCTGA 987 0.4144 MSDSAYRVETTPRLAQWRIENLSSCTYRKSDPFKIGKWNWHLSVEKNRVLFVKLFPEISNLTRDNPPIASFIIRVVSSVGDRKAITHPEIKDKVLKNNEDFVWAIEVPLTGKFIIDVEFLDLKTASPNGGEPCSIWAEGFTQQRSNAKAIESLGRMLTEGIHTDITINASDGSIGAHRAVLAARSPVFRSMFSHNLQEKELSTINISDMSLESCQAFLNYLYGIIKHEEFLTHRLALLHAADKYDISDLRDVCHESLLEDIDTKNVLDRLQNASLYQLMKLKMSCIRYLVKFGKIYEIRDDFNTFLQNADRDLIAEVFHEVLDAWKGF 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00735 328 ProSiteProfiles BTB domain profile. 163 222 IPR000210 GO:0005515
Pumo1g00735 328 CDD BTB_POZ_ZBTB_KLHL-like 162 244 - -
Pumo1g00735 328 PANTHER OS08G0495500 PROTEIN-RELATED 5 327 IPR044714 -
Pumo1g00735 328 SMART BTB_4 163 261 IPR000210 GO:0005515
Pumo1g00735 328 Pfam BTB/POZ domain 156 259 IPR000210 GO:0005515
Pumo1g00735 328 Gene3D Potassium Channel Kv1.1; Chain A 140 291 IPR011333 -
Pumo1g00735 328 SUPERFAMILY POZ domain 149 259 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00735 Pumo-Chr1 11141737 11143986 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Pumo1g00735 BTB 1.4e-22 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00735 K10523 - gmx:100790186 656.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00735 1 11141737 11143986 Pumo1g00735 1 11141737 11143986 ECH
Pumo1g00735 1 11141737 11143986 Pumo9g01526 9 43277150 43281084 PCT