Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00727 ATGGAAGACAACTCTCATTACTCTGTTGATACTCCATTTGAACCAGGTACGGAGGTGGTGAATCCCGTAATTTTAGAAGAAAATGAAGAGCTAGAAAAATGTTCAATTGACGTTGGAGAACAAATTCCGAAGATTGGAATGATATTAGATTCTGAAGAGGAACTTCATACTTTTTATGAGAAATATGCTTATGAAGTTGGATTTGGGATTCGAAAAATTAGCACAAAAACAAAGGGTGAAGTCAAGTATTACTCGCTTGCATGTTCTAAAGGAGGTAAATATGTACGTAAGACAAGTTCTTCTAAGCAAAGATTGTCAAGCAAAACGGATTGTCAAGCAAAAATTTCTGTAATTGTTCATGGAAGTGGGAAATGTACCATTTCTGGTGTTAATCTAGAGCACAATCATGCTCTAAGTCCAAAAAAGTCACGATTTCAAAGGTCTCATAAGAAGATGGAAAGTTATTCAAAAAGAAGGCTTGAATTAAATGATTATGCAGGAATTCCATTGAACAAAAATTCTCATTCATTGGTAGTTGAAGCTAAAAGGTATGAGAACTTGCAATTTGGTGAAAAAGATTTAAGGAATTACACTGCAAAGGCGAGCCAATTAAGACTTGGAGTTGGAGATGCTAACGCACTTTGTAATTACTTCATTCGTATGCAAAGAAGAAATTCAAATTTTTTCTATGTGATTGATATGGATGATGAAGGTCGTTTACAGAATGTTTTTTGGGCAGATGCAAGATCCAGGGCAGCTTATGACTCGTTTGGGGATGTTATATCATTTGATAGTACATATTTGACTAATAGATACAATATGCCTTTTTCTCCTTTTGTAGGGGTGAACCACCATGGACAATCCATCTTGCTTGGGTGTGGTTTATTGTCAACGGAAGACATAGAGACATATGTATGGTTGTTTAAGGCATGGTTGGAATGCATGCGCGGAAGAGCTCCAAAAGCGATAATTACGGATCAATGTCGATCTATCCAAGCAGCAGTGGCAGAGGTATTCCCTCAATCTCACCATCGCTTTTGTCTTTGGCATATTATGAAGAAGGTGCCTGAGAAATTAGGTGGGTTGGCTCAGTATAAAGAAATAAAGAAAACCTTAAAAGCACTTGTGTATGATTCAGTGGAGCTAAATGAATTTATTGATGGCTGGCATAAAATGATTGAGGTTTTTGGTCTTCAAAAAAATGAGTGGTTAAACTCCTTATTTTCTGACCGTGGTCGTTGGGTGCCAATATATGTTAAATCAATATTTTGGGCAGGAATGTCTACGACCCAAAAAAGTGAAAGTATGAATGCATTGTTTGACGGGTATGTTAACTCCAAAACCTCATTGAGGCAATTTCTTGAGCAATATGATAGTGCATTGAAAAGCAAGGTGGATAAGGAGAATAAGGCTGATTTTGATTCTCTTAATTCATCTTATCAACTGATAACAGGTTGCTACTTTGAAAAGCAATTCCAAGAGACTTACACCAATGCAATTTTTAAGTTGTTTCAAGATGAGTTGCGTGGTATGTTGTTTTGCAATTTCACACTGTTAAGAGTTGATGGTCCAATGTCTATATTCAGTGTCATTGAGATTAAAGAAGGTAAGGATGGATATCACAAAAAAAGATTTGCATACACAGTACAATATAATGATGTGGAGTGTGATGTTCGATGTTCTTGTTATTTGTTTGAATTTAGGGGAATAATTTGCAGACATATAGCAAAGATCTTAATTGAAAAGAATGTGAAAGAGATCCCCTCCCGTTACATTCTAACTCGGTGGAGAAAGGATGTAAAGCACAGCCATCATTATATGCTAAATTGTTATGATGAGGTAAGTGAGCAAGGTGTGGAATTTGATAAGTTGCATGCCAACTTTTATGAAGCTGCACATTTAGCCAATTCAAGAGCAAAGTATGAATTTTTTATGGAATGGATAGATAAAGCAAAGGAAAAGCTTAAGGATGATTTGGGTTGGGATAATAGTAATCAAACTACTCTACCAAGTCATTGGACAAGGTGA 2028 0.3609 MEDNSHYSVDTPFEPGTEVVNPVILEENEELEKCSIDVGEQIPKIGMILDSEEELHTFYEKYAYEVGFGIRKISTKTKGEVKYYSLACSKGGKYVRKTSSSKQRLSSKTDCQAKISVIVHGSGKCTISGVNLEHNHALSPKKSRFQRSHKKMESYSKRRLELNDYAGIPLNKNSHSLVVEAKRYENLQFGEKDLRNYTAKASQLRLGVGDANALCNYFIRMQRRNSNFFYVIDMDDEGRLQNVFWADARSRAAYDSFGDVISFDSTYLTNRYNMPFSPFVGVNHHGQSILLGCGLLSTEDIETYVWLFKAWLECMRGRAPKAIITDQCRSIQAAVAEVFPQSHHRFCLWHIMKKVPEKLGGLAQYKEIKKTLKALVYDSVELNEFIDGWHKMIEVFGLQKNEWLNSLFSDRGRWVPIYVKSIFWAGMSTTQKSESMNALFDGYVNSKTSLRQFLEQYDSALKSKVDKENKADFDSLNSSYQLITGCYFEKQFQETYTNAIFKLFQDELRGMLFCNFTLLRVDGPMSIFSVIEIKEGKDGYHKKRFAYTVQYNDVECDVRCSCYLFEFRGIICRHIAKILIEKNVKEIPSRYILTRWRKDVKHSHHYMLNCYDEVSEQGVEFDKLHANFYEAAHLANSRAKYEFFMEWIDKAKEKLKDDLGWDNSNQTTLPSHWTR 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00727 675 Pfam MULE transposase domain 260 354 IPR018289 -
Pumo1g00727 675 SMART 26again6 558 585 IPR006564 GO:0008270
Pumo1g00727 675 Pfam SWIM zinc finger 547 583 IPR007527 GO:0008270
Pumo1g00727 675 Pfam FAR1 DNA-binding domain 57 139 IPR004330 -
Pumo1g00727 675 ProSiteProfiles Zinc finger SWIM-type profile. 547 583 IPR007527 GO:0008270
Pumo1g00727 675 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 37 656 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00727 Pumo-Chr1 11081151 11083607 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pumo1g00727 MULE 3.9e-33 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00727 - - lsv:111921116 933.71