Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00720 ATGGCGCCAACGCTGAACCTCGCCGCCGGTGGAATTCCGTTCCGTTTCTCCTCCTCCGTCGACCGCTCCGCCAGCTTTCCCCGCCGGACCTCCGTCCGCGCCGTCGCGGCGGAGGCGGTGGAGACGCGGCGGCCGGCGGCGAGCCTCTACGAGGTGCTGCGAGTCGAGCGAGACGCGTCGCCGACGGAGATCAAGTCCGCGTACCGGAGCCTCGCGAAGCTCTACCATCCCGACGCCGCGGTGAGACGTTCGCCGGAGACCGACAGCGACGGCGAAGCCGTCGATGGAGACTTCATTCAGCTCCGAAACGCGTACGAGACGCTGTCGGATCCGTCGGCGAGAGCGATGTACGATATGACGCTGGCTGCGGCGCACGGCGGAAGACACCGCCGGTTTTCGGCTCCGCTTAGTCGGAACCACTCGTCGGCGTTTTACACGACGCGAAGGTGGGAAACGGACCAATGCTGGTAG 471 0.6688 MAPTLNLAAGGIPFRFSSSVDRSASFPRRTSVRAVAAEAVETRRPAASLYEVLRVERDASPTEIKSAYRSLAKLYHPDAAVRRSPETDSDGEAVDGDFIQLRNAYETLSDPSARAMYDMTLAAAHGGRHRRFSAPLSRNHSSAFYTTRRWETDQCW 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00720 156 SMART dnaj_3 47 113 IPR001623 -
Pumo1g00720 156 ProSitePatterns Nt-dnaJ domain signature. 98 117 IPR018253 -
Pumo1g00720 156 PRINTS DnaJ domain signature 68 83 IPR001623 -
Pumo1g00720 156 PRINTS DnaJ domain signature 93 113 IPR001623 -
Pumo1g00720 156 PRINTS DnaJ domain signature 50 68 IPR001623 -
Pumo1g00720 156 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 13 156 - -
Pumo1g00720 156 SUPERFAMILY Chaperone J-domain 46 128 IPR036869 -
Pumo1g00720 156 Pfam DnaJ domain 49 118 IPR001623 -
Pumo1g00720 156 CDD DnaJ 50 110 IPR001623 -
Pumo1g00720 156 Gene3D DnaJ domain 34 138 IPR036869 -
Pumo1g00720 156 ProSiteProfiles dnaJ domain profile. 48 121 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00720 Pumo-Chr1 11037657 11038517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00720 39 118 C2H2 Transcription Factor Family AT1G74250 40.000 1.20e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00720 - - gmx:100798752 262.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00720 1 11037657 11038517 Pumo1g00720 1 11037657 11038517 ECH
Pumo1g00720 1 11037657 11038517 Pumo9g01754 9 46713390 46714184 PCT