Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00680 ATGCCAGTCATCGCCGCCAAGCGTACATTGCGATCTCACCCTTCCTCGCCCCCTCGCAAATCGCCCCGCCGGTGCACCGCCGCAACCCCCAATTCCGCCCCACCGAGAAACAGATTTGACGCCGACGAAAACCAAGCTGATCCGGCAGCTGTGAAACCCAAGTGGAATCCCAAAGATGGTGAGCAATTGAAGAGGGCAAAGCTGGCATTACACTTGTCCACTGCGCCATCTTCGGTCGTGTGCCGCGAGGAGGAGCAGAATGTGGTTTTAGAGTTCTGCAAGGGGTGCGTTGAGCACCAGAAGGCTGGGAGTCTTTACATATGCGGGTGTCCTGGAACTGGCAAATCGTTGTCTATGGAGAAAGTGAAAGACAAATTACTCAATTGGGCTACCGAGGCAGGTCTTCCACTGCCAGATGTTTTATCTGTAAATTGTACAACCCTTACCAATACATCAGATATTTTTACTAAGATACTTGGGTTAAACCAAACACAGGGTAAAAAGGTTTCAGCCACGCCCTTACAGCAGCTTCAGAACATGTATTCTCAGAAATCGTCTATCAAGAACATGACATTGATAGTAGCTGATGAATTAGATTATTTGATAACCAAAGACAGAGCCGTGCTCCATGATCTTTTCATGCTCACCACCTTTCCTTTTTCTAGATGTATATTAATAGGTGTAGCGAATGCAATTGACCTAGCTGATCGATTTCTTCCAAGGCTTACATCATTAAATTGCAAGCCTATTGTTGTAAATTTTCGGGCTTACTGTAAAGATCAGATCCTCAAGATTCTTGAAGAAAGATTAAATGAACTTCCTTACACTGTCTTCCAAAAGCAAGCCCTGGAATTATGTGCTAGGAAAGTTGCTGCAGCTTCTGGAGACATGCGGAATGCTCTTTGTATATGCGGGAGTGCAATAGAGATGCTTGAAGCAGAAATTAGAGAATCTGCCTGCAGTTTGAATACTTCACTGGAAGAGATATCATCCTCCAAACAAAATCTTGCTACAGCTCCTGATTTTATCAAAAAACGAGAATTTGATACTGTAAGGACTGATCATATGGCTCGTGCCTTGTCCAAGACATATAGATCACCGGTGGTGGATACAATACAATCTCTGCCACATCATCAGCAGATTATACTCTGCTCTTCTATGAAGCATTTTCGTGGAGCCAAGAAAGATACAATCCTTGGAGAGTTGTATAAATCGTATGTGGGGATATGCAAATCTTGTTTAATTCCTCCAGCGGGAATCTTAGAATTTTCAAACATGTGCAGAGTGCTAAATGACCAGGGCCTTATTAAACTTGGACAATCTCGAGAGGATAAATTGAGAAGAGTGTCGCCTAAAGTAGATGAGGGTGATATTACTTTTGCATTGCAGGGAATACGTTTTTTTCAAAACTGTCTTCAATGA 1422 0.4346 MPVIAAKRTLRSHPSSPPRKSPRRCTAATPNSAPPRNRFDADENQADPAAVKPKWNPKDGEQLKRAKLALHLSTAPSSVVCREEEQNVVLEFCKGCVEHQKAGSLYICGCPGTGKSLSMEKVKDKLLNWATEAGLPLPDVLSVNCTTLTNTSDIFTKILGLNQTQGKKVSATPLQQLQNMYSQKSSIKNMTLIVADELDYLITKDRAVLHDLFMLTTFPFSRCILIGVANAIDLADRFLPRLTSLNCKPIVVNFRAYCKDQILKILEERLNELPYTVFQKQALELCARKVAAASGDMRNALCICGSAIEMLEAEIRESACSLNTSLEEISSSKQNLATAPDFIKKREFDTVRTDHMARALSKTYRSPVVDTIQSLPHHQQIILCSSMKHFRGAKKDTILGELYKSYVGICKSCLIPPAGILEFSNMCRVLNDQGLIKLGQSREDKLRRVSPKVDEGDITFALQGIRFFQNCLQ 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00680 473 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 68 317 IPR027417 -
Pumo1g00680 473 FunFam Cell division control protein 246 372 - -
Pumo1g00680 473 MobiDBLite consensus disorder prediction 1 59 - -
Pumo1g00680 473 CDD Cdc6_C 376 458 IPR015163 -
Pumo1g00680 473 SMART Cdc6_C_2 383 462 IPR015163 -
Pumo1g00680 473 Gene3D - 60 247 IPR027417 -
Pumo1g00680 473 CDD AAA 85 243 - -
Pumo1g00680 473 FunFam Cell division control protein 60 245 - -
Pumo1g00680 473 FunFam Cell division control protein 375 465 - -
Pumo1g00680 473 Pfam AAA domain 100 217 IPR003593 GO:0016887
Pumo1g00680 473 Gene3D - 248 371 - -
Pumo1g00680 473 PIRSF Cdc6 5 473 IPR016314 GO:0006270|GO:0051301
Pumo1g00680 473 Gene3D - 372 455 IPR036388 -
Pumo1g00680 473 Pfam CDC6, C terminal winged helix domain 383 461 IPR015163 -
Pumo1g00680 473 SUPERFAMILY "Winged helix" DNA-binding domain 368 471 IPR036390 -
Pumo1g00680 473 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 23 471 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00680 20 472 Core DNA Replication Machinery Family AT2G29680 61.039 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00680 K02213 - gmx:100791200 892.493