Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00673 ATGGTGCAAATGGATACACTCCCTCTTCTCTTCACCGTAGCTGCTCTTTTATCTGCATATTTCCTTTGGTTCCACCTCTTGGCTCGAACCCTTACCGGTCCAAGAGTATGGCCCTTGGTTGGCAGCGTTCCAAGCATGATCATGAACCGCAACCGGGTTCACGACTGGATCACTGCCAACCTCGGCCAAACCGGGGGTTCAGCCACCTACCAAACCTGCACCCTCACCCTCCCTTTCTTCGCCCGCAAGCAGGGTTTCTTTACCGTCACTAGCAATCCCAGAAACATCGAACACATCCTCCGAACCCGGTTCGACAACTACCCCAAAGGACCGCACTGGCAAGCAGCCTTCCACGACCTCCTAGGCCAAGGAATCTTCAACAGCGACGGCGACACGTGGCTCATGCAACGTAAAACCGCTGCCCTCGAGTTCACCACCCGAACCCTAAGACAAGCCATGGCTCGCTGGGTGAACCGGACCATAAAAAATCGGCTATGGTGCATTTTGGATAAAGCTGCTAAGGAAAATGTCTCAGTGGATTTGCAGGACCTTCTTTTGCGTTTAACCTTTGATAACATTTGTGGACTCACCTTCGGTAAAGACCCCGAAACTCTCTCGCCGGAGCTGCCCGAAAACCCCTTCACTGTTGCCTTTGACACTGCCACAGAAATCACCTTGCAAAGGCTTCTGTACCCTGGCATATTGTGGAGGTTGGAGAAGCTTCTTGGCATTGGTAAGGAGAAGAAAATGAATCAGAGTTTGAAGATCGTCGAAACTTACATGAACGACGCCGTTTCAGCTCGCGAGAAATCGCCTTCCGACGACTTGCTATCGAGGTTCATCAAGAAGCGCGACGGCGCCGGCAACCCGCTGAGCGCCGCCGCGCTGCGACAGATCGCGCTGAACTTCCTCCTCGCCGGCAGGGACACGTCGTCGGTGGCGCTCAGCTGGTTCTTCTGGCTCGTCATGAACCACCCCGCCGTGGAAGAGAAGATCCTCGCCGAGTTAACAGCGGTGCTCACTTCCACTCGTGGCGGCGACCGGCGGCGTTGGACGGAGGAGGCGGTGGACTTCGAGGAAGCGGAGAAGCTGGTTTTCCTGAAAGCAGCATTAGTCGAAACGCTGCGTTTGTACCCGTCGGTGCCGGAGGATTTCAAGCATACAGTCTCGGACGACGTGTTGCCGGACGGCACGGAGGTTCCGGCGGGTTCGACGGTGACGTATTCGATTTACGCTGTGGGGAGAATGAAGAGTGTGTGGGGCGAGGATTGCATGGAGTTTAAACCGGAGCGGTTTTTATCGGTTCAGGGAGACCGGTTCGAACCGCCAAAAGACGGTTACAAGTTCGTTGCGTTTAACGCCGGACCGAGAACTTGTTTGGGGAAAGACTTGGCTTACTTGCAGATGAAGTCTGTGGCTTCGGCTGTGCTTCTGCGTTACCGGCTGTCGCCGGTTCCCGGTCACCGGGTGCAGCAGAAGATGTCTCTCACTCTCTTCATGAAGCATGGGCTCCGCGTGTTCTTGCAGCCACGTCAGCTTCAACCACAGGCTGCCACGTCTGCATAG 1566 0.553 MVQMDTLPLLFTVAALLSAYFLWFHLLARTLTGPRVWPLVGSVPSMIMNRNRVHDWITANLGQTGGSATYQTCTLTLPFFARKQGFFTVTSNPRNIEHILRTRFDNYPKGPHWQAAFHDLLGQGIFNSDGDTWLMQRKTAALEFTTRTLRQAMARWVNRTIKNRLWCILDKAAKENVSVDLQDLLLRLTFDNICGLTFGKDPETLSPELPENPFTVAFDTATEITLQRLLYPGILWRLEKLLGIGKEKKMNQSLKIVETYMNDAVSAREKSPSDDLLSRFIKKRDGAGNPLSAAALRQIALNFLLAGRDTSSVALSWFFWLVMNHPAVEEKILAELTAVLTSTRGGDRRRWTEEAVDFEEAEKLVFLKAALVETLRLYPSVPEDFKHTVSDDVLPDGTEVPAGSTVTYSIYAVGRMKSVWGEDCMEFKPERFLSVQGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSVASAVLLRYRLSPVPGHRVQQKMSLTLFMKHGLRVFLQPRQLQPQAATSA 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00673 521 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g00673 521 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g00673 521 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g00673 521 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g00673 521 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g00673 521 Gene3D Cytochrome P450 27 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g00673 521 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g00673 521 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g00673 521 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g00673 521 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g00673 521 CDD CYP86A 73 504 - -
Pumo1g00673 521 FunFam Cytochrome P450 25 514 - -
Pumo1g00673 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Pumo1g00673 521 SUPERFAMILY Cytochrome P450 23 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g00673 521 PANTHER CYTOCHROME P450 25 505 - -
Pumo1g00673 521 Pfam Cytochrome P450 88 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00673 Pumo-Chr1 10222445 10224505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00673 1 511 Cytochrome P450 AT5G58860 73.386 0.0 796
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00673 K15401 - gmx:100787559 978.778