Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00652 ATGGCTGTTTCATGGGAAGAAAGTGTCACTTATTCCATCAACGCAATCTACCTTCTCTTCTCTGCTTATCTCGTCTTTGTAATGCAAATTGGCTTTGCCATGATATGTGCAGGTTCCGTGCGTGCCAAAAATGCCATGAACATAATGCTCACCAACGTGGTTGATGCAGTGGTTGGTAGCATCTCCTTCTACCTCTTTGGTTTTGCATTTGCATATGGCACTTCCAACCCTTTCATTGGCACTGATTTGTTTGCTCTAGCCCACATTCCAAATGGCACTTATGACTGCGCTTTTTTCCTTTACCAATGGGCTTTTGCTATAGCCGTAACCGGCATCACAAGTGGGTCCATAGCTGAGAGAACCCAATTCAGTGCCTATATTGTTTTTTTATTTTTCCTTAGTGGGTTTGTGTACCCAGTTGTGGTTCATTGGGTGTGGTCATCAAGTGGTTGGCTCAGTCCAAGTTCAAGTCACTTGTTGTTGGGCTCAGGTGCCATTGATTTTGCAGGGAGTGGAGTTGTGCATTTGGTTGGTGCAGTTGCTGGGCTCTGGGGGTCCATCATAGAAGGCCCACGGGCCGGTCGCTTTGACCCTTTCGGCAAGCCCGTGCCTCTACGAGGCCACAGTGCAACACTTGTTGTGCTTGGAACGTTCTTGTTGTGGTTTGGTTGGTTTGGGTTTAATCCGGGCTCGTTTGACAAGATCATTGTGGCCTACCCCGGCACGTCGGATGAAGGTAATTGGACCTCGGTGGGTCGGACCGCCTGTGGTGACCACATTAGCTGGTTCGACTGCCGGGGTAGTCACCTTGTTCGGCCGACGGTTATTAGTTGGCCACTTGGGATGCTATGGATGTGTGCAATGGCTTGCTTGGTGGGTTTGTTGCCATCACGTCTGGATGCTCAGTTGTCGAGCCATGGGCTGCCATTCTTTGCGGAGGCAGCCCAATTGCATGGGGGGTGTGGCACGTGGGGTTTGTTATTTACTGGGTTGTTTGCCAAAGAGGAGTTTGTGATTCAAGTCTATAATGCAGGTGAGACAGGGGTGACAAGACCCTATGGTCTCCTACTTGGAGGTGGATGGGGATTGATTGGAGCCCAAGTGATTGAGATTTTGGCAATCTTTGGATGGGTAAGTGTAACAATGGGCCCTATATTATATGCCTTGCACAAGCTTGAGATTTTGAGAATTCCTGTTGATGAGGAAGTTGCTGGCCTTGATATCTCGAGTCATGGAGGATATGCTTATGCTCAAGAAAATACTTATCTCAGATTTTATGGAGATTATATGCCTATTCAACATGACCGATCTTAG 1314 0.4802 MAVSWEESVTYSINAIYLLFSAYLVFVMQIGFAMICAGSVRAKNAMNIMLTNVVDAVVGSISFYLFGFAFAYGTSNPFIGTDLFALAHIPNGTYDCAFFLYQWAFAIAVTGITSGSIAERTQFSAYIVFLFFLSGFVYPVVVHWVWSSSGWLSPSSSHLLLGSGAIDFAGSGVVHLVGAVAGLWGSIIEGPRAGRFDPFGKPVPLRGHSATLVVLGTFLLWFGWFGFNPGSFDKIIVAYPGTSDEGNWTSVGRTACGDHISWFDCRGSHLVRPTVISWPLGMLWMCAMACLVGLLPSRLDAQLSSHGLPFFAEAAQLHGGCGTWGLLFTGLFAKEEFVIQVYNAGETGVTRPYGLLLGGGWGLIGAQVIEILAIFGWVSVTMGPILYALHKLEILRIPVDEEVAGLDISSHGGYAYAQENTYLRFYGDYMPIQHDRS 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00652 437 Gene3D Ammonium transporter AmtB like domains 3 261 IPR029020 -
Pumo1g00652 437 Gene3D Ammonium transporter AmtB like domains 274 427 IPR029020 -
Pumo1g00652 437 ProSitePatterns Ammonium transporters signature. 167 192 IPR018047 GO:0008519|GO:0016020|GO:0072488
Pumo1g00652 437 PANTHER AMMONIUM TRANSPORTER 313 412 - -
Pumo1g00652 437 Pfam Ammonium Transporter Family 313 416 IPR024041 GO:0008519|GO:0016020|GO:0072488
Pumo1g00652 437 Pfam Ammonium Transporter Family 17 235 IPR024041 GO:0008519|GO:0016020|GO:0072488
Pumo1g00652 437 SUPERFAMILY Ammonium transporter 11 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00652 Pumo-Chr1 9825179 9826563 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00652 7 420 Inorganic Solute Cotransporters AT1G64780 53.812 2.19e-152 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00652 K03320 - pvy:116129597 553.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00652 1 9825179 9826563 Pumo1g00652 1 9825179 9826563 ECH