Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00637 ATGAAGAAGCTCTCAACTTCTTCTCATGCATCCCCATCTTCTTCATCCACCACAAGTTTGGACCCAACTATGTGCTCCTCCAAAAGCACCACTTCAGGGTGTCTCACTGCTATCTTGCGCAAAATTCTTTGCTCTGATGGCCTTCCAAGAGACCAAATTAGAGAACTTGATTCAACTTTGAGTGACAAAGATCAAAACTTGAAGGCTAAGCAGAATGCTGAGACTGATACTGATACTGCTACTGCTACTACTTCTGTTACTACTACTACTACTACTCCTGGGATAGTGGCAAGGTTAATGGGTTTGGAAGCAATTGAGATACCTTGTGGGTCAAGACCAAGTGCACTTTTGCGTAGCAGATCCATGAATTCTGTGGACTATTTGGGAGAATGTAATGGAATGGAGGAGGTTCTGCATAAGAGGGTTAAGTCCACATTGTCTTTTAGGGAGGCTCCAACTTTTCTTTTGCACGAAAGTGAGAAGTATTTGGAGCTTAGTTTTGAAGGTGGAGGTGGTGAGAGCAGAGAATTCAAGTCCAATGGGAGAAAGAGAGAACCGGGTTGTGCAGAATTGAAGCAGAAAGTGCCATCAGAGAGAGGTGAGTTGAGGAAAAACAAGAGGGAAAAGGTGTGTGATGAGAAGGGGAAACTTGGCAAGAAAAGGGTGTCTCATGTGTCTAGCGGGAATGTTGGAAGAAGTGATGGTAAACTTCAAGAAATCACCAACACTTTGCATCTTTCCAAGTCTTCATCTGAAAAGAAGAAATGTTTTGATTCTGAGGCAGTGAAGCTGTCACAGAACATGAAGAAGTGCAAGGAAGTTGTGGTTGGTGAAAAGCAGAACAGGAGGAAGAAAAAAAAGAAGAAAACAATCTGTCACACAGAAAACAAGATGGAAATTGAATGCAAGTCAGAAGATTCAAGCCCAGTTTCTGTCCTTGATTTTGACCGTGAAGCTTGTGGAACAGTTGGTTTGAGTTCAAGAAGAAAATTGTCATCAAAGCTTGACAATGATCAGCACCTTCTTGTGCAATCTGATGGTAACTTGATGATTGATGAGAGGAAGGTTGAGGCAATTGACAACAACGACAAACATGAAGGGTCAAAGAAAGAAGAGAAGAATGGCCAGGAGTATATAGATATTTGGGGTGAAGTTTGCAGAATAGTTGAAGATGAATTGGCTGAATCAAATAAGACACATATATGGACCAATAAACAAGGTGATTTAGGTAGCATAAGTGCATATTTGGAGTCTGAAATTTTTTATCACTTGCTAAATGAGCTTGTGGATCAACTTGCTGGCATCCACTGA 1311 0.4134 MKKLSTSSHASPSSSSTTSLDPTMCSSKSTTSGCLTAILRKILCSDGLPRDQIRELDSTLSDKDQNLKAKQNAETDTDTATATTSVTTTTTTPGIVARLMGLEAIEIPCGSRPSALLRSRSMNSVDYLGECNGMEEVLHKRVKSTLSFREAPTFLLHESEKYLELSFEGGGGESREFKSNGRKREPGCAELKQKVPSERGELRKNKREKVCDEKGKLGKKRVSHVSSGNVGRSDGKLQEITNTLHLSKSSSEKKKCFDSEAVKLSQNMKKCKEVVVGEKQNRRKKKKKKTICHTENKMEIECKSEDSSPVSVLDFDREACGTVGLSSRRKLSSKLDNDQHLLVQSDGNLMIDERKVEAIDNNDKHEGSKKEEKNGQEYIDIWGEVCRIVEDELAESNKTHIWTNKQGDLGSISAYLESEIFYHLLNELVDQLAGIH 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00637 436 PANTHER OS05G0128300 PROTEIN 1 435 - -
Pumo1g00637 436 MobiDBLite consensus disorder prediction 65 86 - -
Pumo1g00637 436 MobiDBLite consensus disorder prediction 1 28 - -
Pumo1g00637 436 Pfam DUF761-associated sequence motif 90 104 IPR032795 -
Pumo1g00637 436 Coils Coil 53 73 - -
Pumo1g00637 436 MobiDBLite consensus disorder prediction 72 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00637 Pumo-Chr1 9680299 9682467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00637 27 431 TRM (TON1 Recruiting Motif) Superfamily AT5G58630 26.667 3.90e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00637 - - gmx:102660067 635.95