Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00620 ATGCTCACCGGAAAACCGCCGTGGGAGGGGAACTACGTTGACGTGCTGAGTCGAATCGGTTTCTCCGGCGAGGTGCCGGAGTTTCCGAGCCGGTTGTCGGAGCTCGGAAGGGATTTTCTCGAGAAGTGTTTGAGGAGGGAACCGTGGCGACGGTGGAGCTGCGATCAGCTGCTGCAGCATCCATTTTTGTTGCCGTGTGGTGAGATTGTGGAATCGTCGCCGCGGTGTGTTCTCGACCGAGTTGACTCAGAGTTCTCCGAGTTCGACGAGGAAGAAGAAGAAGATATGAGAATTGAAAATGAAAATTCGGCGAGGGGTAGAATTGGAAAACTAGCGATGAGTGTAAGGGCAAATTGGGAAACGCAAGGTTGGGTGGTGGTGAGGGAACCGGCGGTGGCGGTTGACAGTTATGAGGACGTTAAAGAAGGGACGAATTCGGAAAATTTTGAGATTATGAGAGTACAACATGGAATTCATGTAGGGGCAAATTTGGAATGTTCAGGTTTGGAAAACGAAAGGGTAAAATTGGAAAAGTGGAATTTGGGTGGGAGGGGGCGGTTGGTGCAGTGCAACCACAGTCACAGTGAGAGTGTAGCTGGTTGGAGGTGTCAGTGTGGTTGGGAAAATGTTGATAAGAAAAAAGGAATGATAATGAAAATGAACATTTACAGGTTGTACTGTAAATTATTGAAATCATGTTGTTTGTTCTTGGAGTGTTTAAAAATATATTTAAGTTTTGAGTTAATTATTAATGTTAATTACTTTTCATGGGCGTGTGACAAATTTGTTTTGTTAAGAGTATAA 804 0.4515 MLTGKPPWEGNYVDVLSRIGFSGEVPEFPSRLSELGRDFLEKCLRREPWRRWSCDQLLQHPFLLPCGEIVESSPRCVLDRVDSEFSEFDEEEEEDMRIENENSARGRIGKLAMSVRANWETQGWVVVREPAVAVDSYEDVKEGTNSENFEIMRVQHGIHVGANLECSGLENERVKLEKWNLGGRGRLVQCNHSHSESVAGWRCQCGWENVDKKKGMIMKMNIYRLYCKLLKSCCLFLECLKIYLSFELIINVNYFSWACDKFVLLRV 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00620 267 ProSiteProfiles Protein kinase domain profile. 1 63 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g00620 267 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 130 - -
Pumo1g00620 267 SUPERFAMILY Protein kinase-like (PK-like) 1 67 IPR011009 -
Pumo1g00620 267 Gene3D Transferase(Phosphotransferase) domain 1 1 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00620 Pumo-Chr1 9446330 9448010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00620 1 128 MAP Kinase Kinase Kinase AT1G07150 60.000 9.27e-39 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00620 - - gmx:100818366 389.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00620 1 9446330 9448010 Pumo1g00620 1 9446330 9448010 ECH
Pumo1g00620 1 9446330 9448010 Pumo9g01569 9 43819779 43821765 PCT