Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00608 ATGGCCGCAGCGTTGGAGTGCTGGTCGCGCCGCGCCACCATCGACGAGGACCACGCCGTCCTCATGCAGCCACCCCAACAAGACCCACCACCACCCAGAGACTCTTCTTCTTCTTCTTCTTCCCTCGTCCACAAGAAGCTCCAGAAGCTCACGCGCAACGTCTCCGAGGCCATTGCTTCCCTCAGAAACTCCCTCAACAGCAGCACCATCAACGAATCCTCCAACTCCAAACCCGAGTACGCGCCTCGCAGCCTCGTCTGGACCACCGTCCTCCGCAACCTCACACACCTCTACCCCGGTTCCCAGCTCCCCGAGAAGTTGGTCTGCAACATTCGCAAGCACTACGATTCCTTGCCTCTCAGTTATTCTCAGGCGGGGTTTGATGTGAAAGATGTGTTTCTTCACATGAAGCTGATGGAGCAAGCTTTGGAGGATGAGCAGGCTGCAATTTTGATTCAAGAGGAGTGTGATGGTGAGATTCAGCTTCAGGGGTCTGTGTTCAAGTTGACATTTGCTTGCAACTCTCCAATTTCGTGGCCTGCGATGTCGGGTGCATTGGATGGTTACTCCATTTGCTGCAAGAAGATTCAGATCTTTGAGAAGAAAGGTTTCACCCTTGGGATTGTGCTGCTTCTTGTTCTGTCTGGTGGTGGCCAAGATAAGTTGGTCAGGACCCGGGTTGAAAGCGCTCTCAAGATTGCCGTGAAGAGGCCCAAAGCCGGTGGCGTGAAGCTGCCCTTTGGGCTTTGTGGATGTCAAGAGGAGAACTCCAAGGGGAGAGGACTTGGAGAGATTGAAGAAGATTGTGGCGATGCATACTGTGGAAATGGATTTGAGAATTTGAGCCAAAAGATTCAGCTTCAAGTGCCATTGCCTAGTTCATCTTTTCTTGTAGTGGTGGATGAATGGCAGACTATTCAGTCAGGTGGGGATGAGATTGAAAAATGGTTGTTGAACTCAGATAGTCTTGAGTTTTTAGAACAGATTGGGCCCAATTCGTATAAGGGGACATATATGGGGAAAAAGGTTGGCATTGAGAAGCTTAGAGGGTGTGAGAAGGGAAACTCTTATGAGTTTGAGCTCAGGAAAGATCTGCTGGCACTGATGACTTGTGGGCACAGAAATATTATGCAGTTTTGTGGTGTTTGTGTAGATGACAACCATGGGTTATGTGTAGTGACCAAATTTGTGGAAGGTGGATCTGTTCATGACTTAATGTTAAAGAACAAGAAGCTTCCGAGTAAGGATGTTGTAAGAATTTCAGTTGATGTGGCAGAGGGGATCAAGTTTATGAATGATCACGGTGTTGCGTACAGAGACCTTAATACGCAGAGGATTCTGTTGGATAAGCATGGAAATGCTTGCTTGGGCGATATGGGCATTGTCACTGCCTGCAAGAGTGTTGGAGAGGCAATGGATTATGAAACTGATGGTTATCGATGGCTAGCACCAGAGATAATTGCTGGTGACCCAGAGAGTGTGACAGAGACATGGATGAGTAATGTTTACAGTTTTGGCATGGTAATTTGGGAGATGGTAACTGGTGAGGCAGCATATTCTGCATTTTCACCAGTTCAAGCAGCAGTTGGCATTGCTGCTTGTGGCCTAAGACCTGAAATCCCCAAGGACTGTCCTCAAACTCTAAAGTCTCTCATGACAAAGTGCTGGAACAACACCCCTTCAAAACGCCCCCACTTCTCTGAAATCTTGGCCATTTTGCTGCGACCAAACAACTACAATAGGTAA 1746 0.4828 MAAALECWSRRATIDEDHAVLMQPPQQDPPPPRDSSSSSSSLVHKKLQKLTRNVSEAIASLRNSLNSSTINESSNSKPEYAPRSLVWTTVLRNLTHLYPGSQLPEKLVCNIRKHYDSLPLSYSQAGFDVKDVFLHMKLMEQALEDEQAAILIQEECDGEIQLQGSVFKLTFACNSPISWPAMSGALDGYSICCKKIQIFEKKGFTLGIVLLLVLSGGGQDKLVRTRVESALKIAVKRPKAGGVKLPFGLCGCQEENSKGRGLGEIEEDCGDAYCGNGFENLSQKIQLQVPLPSSSFLVVVDEWQTIQSGGDEIEKWLLNSDSLEFLEQIGPNSYKGTYMGKKVGIEKLRGCEKGNSYEFELRKDLLALMTCGHRNIMQFCGVCVDDNHGLCVVTKFVEGGSVHDLMLKNKKLPSKDVVRISVDVAEGIKFMNDHGVAYRDLNTQRILLDKHGNACLGDMGIVTACKSVGEAMDYETDGYRWLAPEIIAGDPESVTETWMSNVYSFGMVIWEMVTGEAAYSAFSPVQAAVGIAACGLRPEIPKDCPQTLKSLMTKCWNNTPSKRPHFSEILAILLRPNNYNR 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00608 581 SUPERFAMILY Protein kinase-like (PK-like) 303 573 IPR011009 -
Pumo1g00608 581 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 101 573 - -
Pumo1g00608 581 Gene3D Transferase(Phosphotransferase) domain 1 316 577 - -
Pumo1g00608 581 MobiDBLite consensus disorder prediction 16 45 - -
Pumo1g00608 581 PRINTS Tyrosine kinase catalytic domain signature 394 407 IPR001245 GO:0004672|GO:0006468
Pumo1g00608 581 PRINTS Tyrosine kinase catalytic domain signature 544 566 IPR001245 GO:0004672|GO:0006468
Pumo1g00608 581 PRINTS Tyrosine kinase catalytic domain signature 430 448 IPR001245 GO:0004672|GO:0006468
Pumo1g00608 581 PRINTS Tyrosine kinase catalytic domain signature 500 522 IPR001245 GO:0004672|GO:0006468
Pumo1g00608 581 ProSiteProfiles Protein kinase domain profile. 323 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g00608 581 Pfam Protein tyrosine and serine/threonine kinase 355 572 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00608 Pumo-Chr1 9273674 9277545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00608 306 573 MAP Kinase Kinase Kinase AT2G17700 32.234 3.32e-51 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Pumo1g00608 PK_Tyr_Ser-Thr 1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00608 - - gmx:100811417 1041.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00608 1 9273674 9277545 Pumo1g00608 1 9273674 9277545 ECH
Pumo1g00608 1 9273674 9277545 Pumo9g01586 9 44050074 44055215 PCT