Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00598 ATGTCGAAGGTGGTTTGTGTCACGGGAGCCAGCGGCGCCATTGGATCATGGGTGGTCCTCCTCCTCCTCCAGCGTGGCTACACCGTCCATGCCACCGTCCAAGATATCAAGGATGAAAACGAGACGAAACATTTGGAGGAAATGGAGGGAGCAAAGAGTCGTCTCCATCTTTTTGAAATGGATCTTCTTGACATCGACTCCATTGCCGCTGCCATAAAGGGTTGTTCCGGCGTAATCCACCTCGCATGCCCTAACATCATTGGTCAAGTCGAAGATCCTGAGAAGCAGATATTGGAACCGGCGATAAAAGGAACGGTTAATGTGCTGAAGGCGGCGAAGGAAGCGGGGGTGGAGCGCGTGGTGGCGACTTCATCGATATCGTCGATTATGCCAAGTCCTAATTGGCCAGCTGATAAGATTAAGGGAGAAGACTGTTGGACGGACCTTGAATACTGCAACCAGAAGGGGTTGTACTATCCCATTGCAAAGACACTAGCAGAGAAAGCGGGTTGGGACTTTGCAAAGGAGACAGGTTTTGATGTTGTCATGATCAACCCTGGGACAGCATTGGGCCCTCTGCTTCCACCAAGAATCAATTCAAGCATGGCTGTGCTTGTTAGTGTTCTCAAAGGGGGCAAAGAGACGTACGAGGACTTCTTTATGGGAATGGCTCACTTCAAAGATATAGCATTGGCACATATTTTGGCACTTGAGAACAAGAAAGCAGCCGGAAGGCACTTGTGTGTCGAATCTATTCGTCACTTTAGTGATCTTGTCGACAAGGTTGCAGAGTTATACCCTGAATACGATGTGGCTAAGTTGCCAAAGGATACCCAACCAGGGTTGTTGAGAGCAAGTGCAAAGGATGCATCAAAGAAGCTGATTGATTTAGGCCTAGAATTCACTCCTGCTGACCAAATCATCAGGGATGCAGTGGAGAGTTTGAAGAGCAGGGGTTATGTCTAA 966 0.4865 MSKVVCVTGASGAIGSWVVLLLLQRGYTVHATVQDIKDENETKHLEEMEGAKSRLHLFEMDLLDIDSIAAAIKGCSGVIHLACPNIIGQVEDPEKQILEPAIKGTVNVLKAAKEAGVERVVATSSISSIMPSPNWPADKIKGEDCWTDLEYCNQKGLYYPIAKTLAEKAGWDFAKETGFDVVMINPGTALGPLLPPRINSSMAVLVSVLKGGKETYEDFFMGMAHFKDIALAHILALENKKAAGRHLCVESIRHFSDLVDKVAELYPEYDVAKLPKDTQPGLLRASAKDASKKLIDLGLEFTPADQIIRDAVESLKSRGYV 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00598 321 Gene3D - 1 321 - -
Pumo1g00598 321 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 312 - -
Pumo1g00598 321 FunFam Cinnamoyl-CoA reductase 1 1 321 - -
Pumo1g00598 321 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 315 IPR036291 -
Pumo1g00598 321 CDD FR_SDR_e 5 299 - -
Pumo1g00598 321 Pfam NAD dependent epimerase/dehydratase family 5 245 IPR001509 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00598 Pumo-Chr1 9165319 9169762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00598 3 321 Monolignol Biosynthesis Gene Families AT5G58490 65.204 3.04e-163 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00598 - - gmx:100806281 624.78