Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00593 ATGACAATAATAAAGCTTTCATGCATGACAAGGGTATTCCCAGAACACCGTTTGCTACAAGCATCCAATGGATGGCAAGAACAGCACTTCAGTCCTCCTCGTATCCTTCAACAAAACATGGTTAACGTTACTTTGAATAACTCCACAATTTCTTACCCCATTTTGTGTCATTCAGTACAAGATTCTCACTCTGCTGGCATCTTTTATGGTGACGATCCTTTAGCTCACTCCTTCTCACTAATAATGTTCAATCTCATTTTCATCACTGCCATCACTCGCATTCTCCGTGTTCTTCTTAAGCCCCTCAAACAACCCCTAATCATATCTCAAATAATAGGTGGTGTCATTGTTGGGCCTTCCTTTTTGGGGCGCAGTAGATGGTTCCAACGTCACATGACAACCGAGTCAACCCAATTCCTGATTAACAATCTTGGAGTAATGGGATTCATGTTCTTTCTTTTCATTTATGGTGTAAAGATGGATCCAAGTCTTTTAAAAAGATCAGGGAAATTGCATGTATCTACTGCATTGATTGGCATAACAATTCCCACAGTGACAGTGTTTGTTGTGGCACTATGCATGAGAAAGAACATGGACAAAGAATTGGCCATGGTTCCTTCGTTAGGATCAATAGCAGGATACTTAGGGATCACAGCATTCCCTGTTCTCTACCATATCCTCAAAGAGTTTAACCTTCTAAACTCAGATATGGGGCGAATTGCATTGTCCACGGCATTAATTGGTGATACATTTGGTTTGACTTTTATCGTAGCATTTGAGGCATCAAGTCAAGGAGAAACAAAGATATTGAATACCTTATGGTATATGATTTCTCTTGTGGCTTTGATAGCATTCCTTGTGTGTTGTGTTAGGCCCGTAATGATGTGGATCAATAACAATACTCCAGAAGGGCACCCAGTGCAACAGTCCTTTGTGGTTGCCATTCTTCTAGGGGCTTTTGTGATGGGCTTCATAACTGACATGTGTGGCATAGCAATTGCTAATGGGCCATTATTTTTGGGCTTGGCAATTCCAGATGGGCCTCGTGTAGGAGCAACAATTGTAGAAAAGGCCACAACAATTATGACTGATCTCCTTCTACCATTCTCATTCATTATGGTGGGATCATACACTGATTTCTATGCCATGAGTGCTTCTGGCTGGTCCAGCTTGTCACCATTGTTTGTCATGGTTATTACTGGCTACATCCTCAAATTCATTTCCACTTGGATTACTCTGCATTTTTGGCGAATGCCACTTAGAGACGGACTAACCCTCAGCCTCATTATGAGCTTAAGAGGCCATATTGAACTTATATTGTTTGTGCATTGGATGGACAAAAATATCTTAAAGGTGCCTCACTTCACATTACTGGTTCTTATGACAACAATACTGACAGCAGCTTTCACTCCTTTGATCAACATTTTATATGATCCAACAAAGCCTTACATGGTGAACCAAAGGCGGAACATTCAACACAACCCTCCAGATGAAGAGCTTAGAATAGTGTTATGTATTCTCGACACTGAAACCATAAATGGTCTCATCCATCTACTTGATATCTCCAATCCAACCTCAAGCAGCCCCTTTTCAATTTCTGTTGTTAGACTAACTGAGCTTGTAGGTCGTGCCAACCCTATGTTCTTAGACCATGAAAAGCAACAAGTGCCTCCCATTTATCAATGGACAAACACCATAAACGTCCTTAAAAATCATCAGCAACTTGGAGGAATGTTCATGAAGCTCCATTTCTTCACAGCTGTGGCCCCAAAGCAGTCAATGTTCCGAGACATATGTGAGCTTGCCCTTGAACAAGAATCTTCTTTAATCATCTTACCTTTCAACAGTGTTGATGTTCGTAACCATTCAGTGAAAACAGTGAATTCACAAGTCTTGAACCATGCACCTTGCTCAGTTGCAATTTTTATTGACAGGGGTCTTCTTGAAATCAACAACAACACCATAGGCAGTTCCTTTCGTCGAACTAGATATCGATTTGCTATGTTGTTTCTTGGGGGTGGAGATGCTAGAGAGGCTCTTGTTTATGCAGATAGGATGGTTGCTGATCAAGATGTGTCCCTCACAGTTATAAGGTTTCTTTCTCACAACTTTATAGGGTACAATGAAATAGAGAAGAAGCTTGATGATGGAATTGTGACTTGGTTTTGGGTTAAGAATGAGATGAATCAAAGAGTGGTGTACAGAGAGGTGGTGGTTAGAAATGGCGAAGAAACAATTGGAGCTATTCAAGCTATGAATGATGGTGCTTTTGATCTTTTGATAGTGGGAAGGAAACATGGAATAAACCCTATTCTTCTCACTGGGTTATCAGAATGGAGTGAAAGTGATGAGTTGGGACTCATAGGAGACTATGTTTCCTCTGCAGATTTTTTTGGCTCTGCTTCTGTTTTAGTTGTTCAACAACAAATCTTAAGAGGCTAA 2442 0.4066 MTIIKLSCMTRVFPEHRLLQASNGWQEQHFSPPRILQQNMVNVTLNNSTISYPILCHSVQDSHSAGIFYGDDPLAHSFSLIMFNLIFITAITRILRVLLKPLKQPLIISQIIGGVIVGPSFLGRSRWFQRHMTTESTQFLINNLGVMGFMFFLFIYGVKMDPSLLKRSGKLHVSTALIGITIPTVTVFVVALCMRKNMDKELAMVPSLGSIAGYLGITAFPVLYHILKEFNLLNSDMGRIALSTALIGDTFGLTFIVAFEASSQGETKILNTLWYMISLVALIAFLVCCVRPVMMWINNNTPEGHPVQQSFVVAILLGAFVMGFITDMCGIAIANGPLFLGLAIPDGPRVGATIVEKATTIMTDLLLPFSFIMVGSYTDFYAMSASGWSSLSPLFVMVITGYILKFISTWITLHFWRMPLRDGLTLSLIMSLRGHIELILFVHWMDKNILKVPHFTLLVLMTTILTAAFTPLINILYDPTKPYMVNQRRNIQHNPPDEELRIVLCILDTETINGLIHLLDISNPTSSSPFSISVVRLTELVGRANPMFLDHEKQQVPPIYQWTNTINVLKNHQQLGGMFMKLHFFTAVAPKQSMFRDICELALEQESSLIILPFNSVDVRNHSVKTVNSQVLNHAPCSVAIFIDRGLLEINNNTIGSSFRRTRYRFAMLFLGGGDAREALVYADRMVADQDVSLTVIRFLSHNFIGYNEIEKKLDDGIVTWFWVKNEMNQRVVYREVVVRNGEETIGAIQAMNDGAFDLLIVGRKHGINPILLTGLSEWSESDELGLIGDYVSSADFFGSASVLVVQQQILRG 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00593 813 FunFam Cation/H(+) antiporter 24 79 484 - -
Pumo1g00593 813 Pfam Sodium/hydrogen exchanger family 86 467 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Pumo1g00593 813 Gene3D - 79 482 IPR038770 -
Pumo1g00593 813 PANTHER CATION/H + ANTIPORTER 55 809 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00593 Pumo-Chr1 9103324 9106714 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00593 9 810 Antiporter Super Family AT5G37060 40.215 0.0 651
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00593 K26731 - gmx:100783296 1310.05