Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00588 ATGGTTGTTTCAGATACTGCTATGTTAGCTCCTGAGGAGTTATTTGATGGCAACGGAACCAGTGGGAATTGCCAAGGCATTAGCAGTGAAGAACGGGGACCAGTTGGATTCAAATCAACAGATAATCAAGAAAGAGATTCTGGAAGCATGTACACAGATTGCGACATCCTTCCTCCAAGGAAAATCAATGATGTCAATGGCTCAATGCAAAAAAGGTTATTAGGCTCTTATGAGGAGTTCCTTCTTCCAGGGGAAGTTATAATGGAACAAGGGAATGATGTAGATCAACTATATTTTGTCTGTCATGGGATGCTTGTGTGA 321 0.4143 MVVSDTAMLAPEELFDGNGTSGNCQGISSEERGPVGFKSTDNQERDSGSMYTDCDILPPRKINDVNGSMQKRLLGSYEEFLLPGEVIMEQGNDVDQLYFVCHGMLV 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00588 106 ProSiteProfiles cAMP/cGMP binding motif profile. 80 106 IPR000595 -
Pumo1g00588 106 MobiDBLite consensus disorder prediction 12 53 - -
Pumo1g00588 106 SUPERFAMILY cAMP-binding domain-like 75 105 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00588 Pumo-Chr1 9062269 9064034 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00588 77 105 Ion Channels AT3G02850 82.759 9.60e-12 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00588 K21867 - cpap:110809747 64.3142