Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00587 ATGACACTCACAACATTTGCAGAATTTGGCATGGTAATCCATTTCTTTAAGATGGGGGTGCAAATCAATCCTAAGCAACTCTTAAAGATTGAAAGGCAAGCAGTAGCAATTGGTCTAATAGGCCACATGTCTGCTATAGCACTTGGTGGTGCAATTTTCAATATTGTTAGAGTAATCTACCCTGAAGGGACGGAAGGCACTGGTGTTCACGTTTTAGTGATATCATCTTCTGTGACTGCATTTCCTGTTATAAGTGGCTTTCTAGCTGAGATGAACATTCTTAATTCAGAAGTTGGACGTATGGCTATATCCACTTCCATGGTTAGTGATTCATGCATGTGGATATTGTATTTTGTGGTTATCAATAGTGCTAAAGCAGTGGAACGCCAAACATATAAACCTGTTATAGAAATAGCCGTGACAATTTGTTATTTCTCGATCTTATTCTTTTTTCTAAGGCCATTAGTTTTATGGATCTCCAACCGCAATCCACAAGGAAAGCCTATGACAGAAAGCCATTTCTTGTCAATCATTTGTATACTTTTATTTGTTGGATTCTCTGCAAGTGTTGCAGGACAACCTCCTTTCCTTGTTGCGTTTTGTTTTGGCTTGATCTTACCAGATGGTCCCCCTTTAGGTTCTGTTCTGACAGAAAGACTTGACACTGTTGGTTCTACTTTGTTGGTTCCATCTTACTGTACTATTACTGGCCTTAGGACCAATGCTCCTTCATTATTAGAATCAAAGTCAGCAACCATAGAGATTATCTTAATTGCAATGTACATAGGAAAGTTTGTGGGAACCATTTTACCCTCACTTCTCTTTCAGATTGAATTTTGGGATTCTTTTGCACTCGCTCTAATCATGTGTTGCAAAGGCCTCGTTGATCTCTGCATGCTCAACATGTTATTGAATTCTAAGGCAATAGGAGAACTTTCTTTCACCCTTGCTATATTTACTATGGTGGCCGTAACTGGGTTTGCAACTATAGTTGTTTATTACATATATGATCCTTCAAGGAGGTATAAAGCCTATAATAGAAAGACAATTAAGGACGCTCAACATGAACCTTATCTGAAAATACTTGTCTGTGTTCACAATGAAGAAAATGTATATCCAATCATCAACCTTCTTCAAGCCTCCAACCCCACAAAGGCTACACCCCTCTCAGTCTTTGTCCTACATCTCATGGAGCTCTCGGGAAGGGCAGTTTCCATTCTCACAAAAAATGCTGAGCACTAA 1242 0.3905 MTLTTFAEFGMVIHFFKMGVQINPKQLLKIERQAVAIGLIGHMSAIALGGAIFNIVRVIYPEGTEGTGVHVLVISSSVTAFPVISGFLAEMNILNSEVGRMAISTSMVSDSCMWILYFVVINSAKAVERQTYKPVIEIAVTICYFSILFFFLRPLVLWISNRNPQGKPMTESHFLSIICILLFVGFSASVAGQPPFLVAFCFGLILPDGPPLGSVLTERLDTVGSTLLVPSYCTITGLRTNAPSLLESKSATIEIILIAMYIGKFVGTILPSLLFQIEFWDSFALALIMCCKGLVDLCMLNMLLNSKAIGELSFTLAIFTMVAVTGFATIVVYYIYDPSRRYKAYNRKTIKDAQHEPYLKILVCVHNEENVYPIINLLQASNPTKATPLSVFVLHLMELSGRAVSILTKNAEH 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00587 413 Gene3D - 1 345 IPR038770 -
Pumo1g00587 413 Pfam Sodium/hydrogen exchanger family 2 331 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Pumo1g00587 413 PANTHER CATION/H + ANTIPORTER 2 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00587 Pumo-Chr1 9046650 9048320 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00587 1 412 Antiporter Super Family AT1G06970 34.217 4.88e-68 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00587 K26731 - gmx:100804488 728.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00587 1 9046650 9048320 Pumo1g00587 1 9046650 9048320 ECH