Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00579 ATGAAGGATGTTGTGATAGTTAAACCCTCCGAGCCTACACCATCTGATCTTCTTGCACTGTCCACCATTGACAGTGATCCAGTTCCCAACAGTCTGTGTCAAACCATTTACGTATACAAAGCAAATCTTGATTCCCCAAATGGCAAACCAGACCCTGCTCATGTGATAAAAGAAGCCCTCTCAAAGGCTTTGGTTTACTATTATCCTCTTGCAGGGAAGATAGTAACATTAGATGATGGAAAACTTGGAATCAACTGCAATGCTGATGGAGTTCCATTCTTGGAGGCAACTGCTAACTGTGAACTCTCTTCTCTTCACTATCTTGAAGGGATTGATGTTCCAACTGCACTAAAACTGGTGACCAAGTTTATCTGTGGGGATTTCACTATTGGAGTGGGCTTGTCACACAGTGTTTGTGATGGGTTTGGTGCATCTCAATTCTTCAGAGCCTTGGCTGAACTTGCATGTGGAAAAAGTGAGCCCTCAGTGAAACCTATGAGACTTCAAGGGCAGTTTCACCATTTTGGACCAATTAAGGAGATTTCACATGAATGCTTTAACTTAAACGGTAAGAGCATACTGAAAATGGAACTGATGAAGGAAAGTGATGATGTGAAGGAAAGCTTCACAACTCTTGAAGCACTTGGTGCCTATGTTTGGAGGTCAAGGGCTAGAGCTTTGGAATTGAGCTCCGATGGAAAAACTATGTTGTGTTTAGCAGTAGGGGTGAGGCACCTATTGGATCCACCTTTGCCTGAAGGGTATTATGGGAATGCTTTTTTGGGTTCGTATGTGTTGCTAACAGTGAAAGAACTCGATGAAAGACCACTCTCAGAGATTGTGAAGCTAATCAAAGAGAACAAAAAGCTTTCTTCTAATAATGAGTACATCAGAAACACAGTAAACATGTTGGAGACAATGAGACAAAGGAACATTAGGATTGAAGGAACTGGTGCATCTGTGGTGTTAACAGATTGGAGGCAGCTGAGTTTGTTGGAAGAAGTGGATTTTGGATGGAAGACTTCAGTGAATATAGTACCAGTTCCACGGGACATGTTAGGGTATGTGGACTTGTGCCTTTTCTTGACCCCTAGTAACTTGGATCCTTCAATGAAAGGAGGAGTTAGGGTCTTTGTTTCCCTCCCCAAAGCCTCCATGCCCAAGTTCAGGGAGGAGATGGAGGCCCTCAAGCTTATGAGAGGTGATGAGAGTAGTAGCACCTAG 1224 0.4322 MKDVVIVKPSEPTPSDLLALSTIDSDPVPNSLCQTIYVYKANLDSPNGKPDPAHVIKEALSKALVYYYPLAGKIVTLDDGKLGINCNADGVPFLEATANCELSSLHYLEGIDVPTALKLVTKFICGDFTIGVGLSHSVCDGFGASQFFRALAELACGKSEPSVKPMRLQGQFHHFGPIKEISHECFNLNGKSILKMELMKESDDVKESFTTLEALGAYVWRSRARALELSSDGKTMLCLAVGVRHLLDPPLPEGYYGNAFLGSYVLLTVKELDERPLSEIVKLIKENKKLSSNNEYIRNTVNMLETMRQRNIRIEGTGASVVLTDWRQLSLLEEVDFGWKTSVNIVPVPRDMLGYVDLCLFLTPSNLDPSMKGGVRVFVSLPKASMPKFREEMEALKLMRGDESSST 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00579 407 Pfam Transferase family 6 395 - -
Pumo1g00579 407 Gene3D - 178 393 IPR023213 -
Pumo1g00579 407 Gene3D - 1 177 IPR023213 -
Pumo1g00579 407 PANTHER ACYL TRANSFERASE 4 3 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00579 Pumo-Chr1 8983603 8984948 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00579 1 391 Monolignol Biosynthesis Gene Families AT5G48930 26.818 6.01e-35 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00579 K20240 - gmx:100801843 690.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00579 1 8983603 8984948 Pumo1g00579 1 8983603 8984948 ECH