Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00574 ATGCCTTCTACTACTCTTCAATGGCTAAGCCTTGTTGGCATCATTTGGCTCCAAGCCATAATTGGAACAAACACCAATTTCCCTGCTTACTCTTCTCAGCTGAAGCAACTTCTTTCCATTTCCCAAGTCCAACTCAATAACCTTGCTTTTGCATCTGATGCAGGCAAGCTTTTTGGCTGGATTTCTGGCCTTGCTTCTATTTACCTCCCCCTTTGGTTAGTCCTCTTGATTGGTTCAACTCTTGGGTTAGTAGGTTATGGCGTGCAATATCTCTTCATAACCAACCAAATTTCCTCTTTGTCCTATTGGCATGTCTTCTTACTAACTTTTCTTGCTGGCAATAGCATTTGTTGGATTAACACAGTGTGCTATGTTGTCACCATAAGGAACTTCCTATCTGATCGCCAAGTTGCTGTGGGAATAACAACTAGCTACCAAGGACTAAGTGCAAAGATTTATGCCAACATTGTTGATGCTGTTTCTCCTCACAAGAAGGCTAGAACATTTCTCTTCCTCAACTCTCTCTTACCTGTGATAGTTGGCCTAGTAGCAGCTCCTCTAGTCAGAGAAATTGAAGTCACAAGTGCTAGGCACACGCGTGTTGGGTTTGCTGTGATGTTTGTTATTACCATTTCCACTGGAATATATGCTGTGTTGAGCAGCTTGCAATTTGTCACAAGCAAAGCATCCTCACTAGGTATCTTGATTGGTATTCTACTGTCCCTTCTCTTGCCTCTACTAGTCCCTCTTTCGGTGAAGATCAAGGAACTTCAGGAAAATAGAGAGAAATTGAGAATCTACCATTTTACTATGGAGGAGAATTATACTAGTGAAGAGAGGGTGGAGAATGAGGTGAAAGAGGGTGAAGTTCAAGAAGAGGTTGGCATTATAGAAGAAGTTGGAGTGAAGTTGATGCTGAGAAGAATAAATTTCTGGTTATATTTCTTTGTCTATTTTTTTGGTGCAACAGTTGGTTTAGTATATCTTAATAACTTGGGACAAATAGCTGAATCCCGGGGTTGCTCTAATACTTCATCTTTGGTGTCTTTGTCATCATCATTTGGGTTCTTTGGCCGTCTCATGCCATCTCTTATGTGCTACTTCTACAGGGGAAAGAGTAGAATTTCAAGACCTGCTACTATGTTGGCAGTGATGGTTCCAACAGCAGGTGCATTTTTCTTGCTTCTCGACAAAACTGACCTTGCCCTCTACATCAGCACTGCAGTGATTGGAGTGTGTACTGGAGCAATCACTTCCATTGCTGTTTCCACAACCACTGAGCTATTTGGTACTAAGCATTTCTCAGTGAACCATAATGTGGTGGTGGCCAACATTCCTATTGGCTCCTTTATATTTGGCTACTCAGCAGCACTTATTTACCATAAGGAAGGGAATGAACATGCGCATGGGAAATGCATGGGCATGGAATGCTACAGAAACACTTTTATCATGTGGGGTTCCTTTTGTTTCCTTGGAACTCTTTTGGCTTTGATTCTACATGCTAGGACTCGCAAGTTTTACTCACAAAAACAATAA 1536 0.4167 MPSTTLQWLSLVGIIWLQAIIGTNTNFPAYSSQLKQLLSISQVQLNNLAFASDAGKLFGWISGLASIYLPLWLVLLIGSTLGLVGYGVQYLFITNQISSLSYWHVFLLTFLAGNSICWINTVCYVVTIRNFLSDRQVAVGITTSYQGLSAKIYANIVDAVSPHKKARTFLFLNSLLPVIVGLVAAPLVREIEVTSARHTRVGFAVMFVITISTGIYAVLSSLQFVTSKASSLGILIGILLSLLLPLLVPLSVKIKELQENREKLRIYHFTMEENYTSEERVENEVKEGEVQEEVGIIEEVGVKLMLRRINFWLYFFVYFFGATVGLVYLNNLGQIAESRGCSNTSSLVSLSSSFGFFGRLMPSLMCYFYRGKSRISRPATMLAVMVPTAGAFFLLLDKTDLALYISTAVIGVCTGAITSIAVSTTTELFGTKHFSVNHNVVVANIPIGSFIFGYSAALIYHKEGNEHAHGKCMGMECYRNTFIMWGSFCFLGTLLALILHARTRKFYSQKQ 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00574 511 CDD MFS_Mch1p_like 6 493 - -
Pumo1g00574 511 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 508 - -
Pumo1g00574 511 SUPERFAMILY MFS general substrate transporter 11 505 IPR036259 -
Pumo1g00574 511 Pfam Nodulin-like 7 249 IPR010658 -
Pumo1g00574 511 Gene3D MFS general substrate transporter like domains 234 503 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00574 Pumo-Chr1 8962701 8964736 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00574 1 510 Nodulin-like Gene Family AT2G30300 49.808 3.92e-156 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00574 - - gmx:100800763 848.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00574 1 8962701 8964736 Pumo1g00574 1 8962701 8964736 ECH
Pumo1g00574 1 8962701 8964736 Pumo9g02619 9 62121142 62121754 PCT