Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00573 ATGGTTTCCAGGGTTCACAAGAGAACAGCCATGTACAGGAACCTACAATTGCTTCGTTCAATCAGATACTCCCACTCGCGCCCTAAAGCCTCAGTGTTATTCGAGGTGTCAGATTACATTCAAGGTTTAAAGCAAAAGCTGCAAGAATTGAACCAGTTAACAGTGGCAACGGCACGAAAAATTGTTGACTATGATCCAATGCCTAAGCTTGAAGTTGAAACACAAGAAGAGGGTTTTGTGATCAAGGTGCTGAGTGAAAACAGTTGCCAGGGGTTGTTGGTGTTTATATTGGAAGCCTTTGAAGAGCTGGGTCTTGATGTGCTCCAGGCTAGGGTTTCTTGTGCGGACAGCTTCAGTTTAGAAGCTCTCGGAAACAAAGTAACGATCGATGTGACACACACATACACACTTAATTATCTAAATCACAAGAGCAATACTAATTGTGGTAGTGCAACGTTTGTAGGCACAATCAATCAAAAACTTTAG 486 0.4239 MVSRVHKRTAMYRNLQLLRSIRYSHSRPKASVLFEVSDYIQGLKQKLQELNQLTVATARKIVDYDPMPKLEVETQEEGFVIKVLSENSCQGLLVFILEAFEELGLDVLQARVSCADSFSLEALGNKVTIDVTHTYTLNYLNHKSNTNCGSATFVGTINQKL 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00573 161 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 2 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00573 Pumo-Chr1 8912065 8914086 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00573 - - gmx:100527278 219.164
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00573 1 8912065 8914086 Pumo1g00573 1 8912065 8914086 ECH
Pumo1g00573 1 8912065 8914086 Pumo1g00310 1 4708396 4709931 ECH
Pumo1g00573 1 8912065 8914086 Pumo9g02252 9 55772379 55773878 ECH
Pumo1g00573 1 8912065 8914086 Pumo5g01030 5 23065066 23066953 ECH
Pumo5g01030 5 23065066 23066953 Pumo1g00573 1 8912065 8914086 ECH
Pumo1g00573 1 8912065 8914086 Pumo9g02618 9 62092538 62094191 PCT