Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00571 ATGTCTTTTCCAAGCATCTGCTCCATCCCTTCTGCTGCTCATCAATGTCTAAGCCTTGTAGGCATCATTTGGCTCCAAGCCATTAATGCAACAAACACCAATTTCCCTGCTTACTCTTGCCAGCTGAAACAACTTCTTTCCATATCCCAAGTGCAGCTCAATAACCTTGCCTTTGCCTCTGATGCAGGCAAACTTTTTGGCTGGGTTTCTGGCCTTGTTTCTATTTACATCCCCCTCTGGCTAGTCCTCTTGATTGGTTCAACTCTTGGCTTAATTGGTTATGGTGTGCAATATCTCTTCATAACCAACCATATTTCCTCTTTGTCCTATTGGCATGTCTTCTTACTAACTATTCTGGCTGGCAATAGCATTTGTTGGATTAACACAGTATGCTATGTTGTTATCATAAGGAATTTCCCAGCTGAAGGCCAAGTTGCTGGGGGACTAACAACTAGTTACCAAGGGCTAAGTGCAAAGCTTTACACTGACATTGTTGCTAGAGAAATTAAGGCCACAGGTCTTAAGAACATTGGTTTTGAATTTGCTTTATTGTTTGCTATTACAATTGCCACCAGAATATATGCTGTGATGACCAGCTTGCAATCTGTCACAAGCAAAATGTCCTCACTGGTCATCCTGATTGGTATTCTAGTATCTCTTCTCTTGCCTCTTTTAGTCCCAGTTTCTTTGAAGTTCAAGGAACTAGTTGGATCACGAAACACAAATAGAGAGAGACCAAGAGTCTGCAATTTTCCTATGGAGAAAACCAATAATGAAGTGACAGAGGGTGAAGATTGCAGAGAAGTTCAAATGATTGGTGTTAGAGAAGAAATTGGAGTAAAGTTGATGCTTAGAAGAGTAGATTTCTGGTTGTATTTCTTCATCTACTTTTTTGGAGCAACAATTGGTTTAGTATATCTTAATAACTTGGGACAAATAGCTGAATCCAGGGGTTTCTCTGGTACTTCATCTCTGGTGTCATTGTCTTCATCTTTTGGGTTTTTTGGCTGTCTCGTTCCATCTCTTTTGGACTACTTCTCCAGGGGAAAGAGTAGAATTTCAAGACCTGCTACTATGTTGGCAGTGATGGTTCCAACATCAGGTGCATTTTTCTTACTTCTTAACAAAACTGACCTTGCCCTTTACATCAGCACTGCAGTGATTGGAGTGTGTACTGGAGCAATCACTTCCATTGCTGTTTCCACAACCAGTGAGCGATTTGGTACTAAGCATTTCTCAGTGAACCATAATGTGGTGGTGGCCAACATTCCTATTGGCTCCTTAATATTTGGCTACTCAGCAGCACTTATTTACCATAAGGAAGGGCATGAACATGAGCATGGGAAATGCATGGGCATGGAATGCTACAGAAACACTTTTATCATCTGGCGTTCCATTTGTTTCCTTGGAACTCTTTTGGCTTTGATTCTGCATGCTAGGACTCGCAAGTTTTACTCACAACAGTAG 1467 0.4117 MSFPSICSIPSAAHQCLSLVGIIWLQAINATNTNFPAYSCQLKQLLSISQVQLNNLAFASDAGKLFGWVSGLVSIYIPLWLVLLIGSTLGLIGYGVQYLFITNHISSLSYWHVFLLTILAGNSICWINTVCYVVIIRNFPAEGQVAGGLTTSYQGLSAKLYTDIVAREIKATGLKNIGFEFALLFAITIATRIYAVMTSLQSVTSKMSSLVILIGILVSLLLPLLVPVSLKFKELVGSRNTNRERPRVCNFPMEKTNNEVTEGEDCREVQMIGVREEIGVKLMLRRVDFWLYFFIYFFGATIGLVYLNNLGQIAESRGFSGTSSLVSLSSSFGFFGCLVPSLLDYFSRGKSRISRPATMLAVMVPTSGAFFLLLNKTDLALYISTAVIGVCTGAITSIAVSTTSERFGTKHFSVNHNVVVANIPIGSLIFGYSAALIYHKEGHEHEHGKCMGMECYRNTFIIWRSICFLGTLLALILHARTRKFYSQQ 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00571 488 Gene3D MFS general substrate transporter like domains 15 479 IPR036259 -
Pumo1g00571 488 SUPERFAMILY MFS general substrate transporter 171 483 IPR036259 -
Pumo1g00571 488 Pfam Nodulin-like 17 165 IPR010658 -
Pumo1g00571 488 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 182 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00571 Pumo-Chr1 8894946 8900922 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00571 17 488 Nodulin-like Gene Family AT2G30300 46.887 7.92e-141 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00571 - - gmx:100800763 645.966