Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00570 ATGGCTTCTAATTATATTCAATCTGTGCTTGTGCTTGTTGTGGCCACATTGGCCACATTTATGATCCCTTCCATTAATGCAGAGCTTAGTCCTCGTTTCTATAAGAAAGTTTGTCCCCAGGCATTGCCAAAAATAAGAGCAGTCGTTCACCGAGCAATTATTCGTGAACCGCGCATTGGAGCCTCCTTGCTGCGCTTGCATTTCCATGACTGCTTTGTTAATGGATGTGATGGATCAGTTCTGCTGGATGACACGCGGAACTTCACTGGCGAGAAAACAGCCCTACCAAATCTTAATTCAATAAGAGGCTTCGACGTGGTTGATGAGATTCAGGCAGCGGTTGACAAAGCTTGCAAACGCCCTGTCGTATCATGTGCTGATATCTTAGCTACAGCTGCTCGTGATTCTGTGGCCATTTTGGGGGGTCCACACCTATGGTACCGCGTATTACTAGGCAGAAGAGACGCCAGAAGTGCAAGCAAGGATGCTGCAAACGCCAATCTCCCTCCTCCATTCTTCAGCTTCTCACAGCTTCTCTCCAACTTCAACTCTCACGGAATGGACCTCAAAGACTTGGTGGCACTCTCTGGTGGCCACACCATAGGGTTTGCAAGGTGCACCACCTTCAGGGACCGCATCTACAACGACACCAACATAAACCCTACCTTTGCAGCCTCTTTGCGCAGAAAATGCCCTAGAGCTGGCGCTGACAACAACTTGGCACCGTTGGATCCAACTCCTGCAACTGTTGATACTTCTTACTACAGGGAATTGTTGCGCAAAAAGGGTCTTCTTCACTCTGACCAAGAACTCTACAAGGGAAATGGCAGTGAAAGTGACAGGTTGGTGGAGCTTTATAGCAGGAACCCTTTTGCGTTTGCTAGAGACTTTAAGGCTTCTATGATCAAAATGGGTAACATGAAGCCTCTCACTGGGAACAAGGGAGAGATCAGACGCAACTGCAGAAAAGGCTGTGATGGATCAGTTCTGCTGGATGACACCCCCAACTTCACTGGGGAGAAGACTGCCCTGCCAAATATAAACTCAATAAGAGGTTTGGAGGTGGTTGATGAAATTAAAGCAGCGGTTGACAATGCTTGCAAACGTCCCGTGGTATCATGTGCAGATATCTTAGCTGTAGCCGCTCGTGATTCTGTGTCCATATTGGGAGGCTCACTTTATTGGTACAAAGTGTTACTAGGCAGAAGAGATGCAAGAACTGCTAGCAAAGATGCTGCAAACTCAAATCTTCCTCCCCCATTTTTCAGCTTCTCTCAGCTACTTTCTAGTTTTCAGTCTCACGGAATGGACCTTAAAGATCTCGTAGCTCTCTCTGGTGCACACACCATTGGATTTGCGCAATGCTCTACCTTTAGGAACAGGATCTACAATGACACCAACATAGACCCCAGCTTTGCATCATCTTTGCAGGGCACGTGCCCTAGAAATGGTGGAGACAGCAATCTGGCACCATTGGATCGTGTCTCTCCCTCAAGAGTTGACACTTCTTACTATACCTCTTTGCTAAGTAAAAAGGGTCTCCTCCATTCTGATCAAGAGCTCTTCAAAGGAGATGGTGGTGAGAGTGACACTTTGGTGAAGCTATACAGCAGGAACCCTTTTGCTTTTGCTAGAGATTTTAAAGCTTCTATGATCAAGATGGGTAACATGAAGCCTCTTACTGGGAATGCTGGAGAGATCAGACTCAATTGTAGAAGAGTCAACTAA 1728 0.467 MASNYIQSVLVLVVATLATFMIPSINAELSPRFYKKVCPQALPKIRAVVHRAIIREPRIGASLLRLHFHDCFVNGCDGSVLLDDTRNFTGEKTALPNLNSIRGFDVVDEIQAAVDKACKRPVVSCADILATAARDSVAILGGPHLWYRVLLGRRDARSASKDAANANLPPPFFSFSQLLSNFNSHGMDLKDLVALSGGHTIGFARCTTFRDRIYNDTNINPTFAASLRRKCPRAGADNNLAPLDPTPATVDTSYYRELLRKKGLLHSDQELYKGNGSESDRLVELYSRNPFAFARDFKASMIKMGNMKPLTGNKGEIRRNCRKGCDGSVLLDDTPNFTGEKTALPNINSIRGLEVVDEIKAAVDNACKRPVVSCADILAVAARDSVSILGGSLYWYKVLLGRRDARTASKDAANSNLPPPFFSFSQLLSSFQSHGMDLKDLVALSGAHTIGFAQCSTFRNRIYNDTNIDPSFASSLQGTCPRNGGDSNLAPLDRVSPSRVDTSYYTSLLSKKGLLHSDQELFKGDGGESDTLVKLYSRNPFAFARDFKASMIKMGNMKPLTGNAGEIRLNCRRVN 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00570 575 Pfam Peroxidase 323 538 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo1g00570 575 Pfam Peroxidase 46 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo1g00570 575 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601
Pumo1g00570 575 Gene3D Peroxidase, domain 2 418 554 - -
Pumo1g00570 575 Gene3D Peroxidase, domain 2 169 304 - -
Pumo1g00570 575 PRINTS Haem peroxidase superfamily signature 493 508 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo1g00570 575 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo1g00570 575 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo1g00570 575 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo1g00570 575 CDD secretory_peroxidase 324 574 IPR033905 GO:0004601|GO:0042744
Pumo1g00570 575 Gene3D - 33 322 - -
Pumo1g00570 575 FunFam Peroxidase 32 172 - -
Pumo1g00570 575 FunFam Peroxidase 418 554 - -
Pumo1g00570 575 SUPERFAMILY Heme-dependent peroxidases 323 575 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pumo1g00570 575 ProSiteProfiles Plant heme peroxidase family profile. 28 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo1g00570 575 SUPERFAMILY Heme-dependent peroxidases 28 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pumo1g00570 575 ProSitePatterns Peroxidases proximal heme-ligand signature. 191 201 IPR019793 -
Pumo1g00570 575 Gene3D - 323 572 - -
Pumo1g00570 575 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo1g00570 575 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo1g00570 575 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo1g00570 575 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo1g00570 575 PRINTS Plant peroxidase signature 190 202 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo1g00570 575 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo1g00570 575 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo1g00570 575 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo1g00570 575 CDD secretory_peroxidase 28 323 IPR033905 GO:0004601|GO:0042744
Pumo1g00570 575 PANTHER PEROXIDASE 72-RELATED 26 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo1g00570 575 ProSitePatterns Peroxidases proximal heme-ligand signature. 440 450 IPR019793 -
Pumo1g00570 575 ProSiteProfiles Plant heme peroxidase family profile. 323 575 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo1g00570 575 FunFam Peroxidase 169 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00570 Pumo-Chr1 8879823 8887630 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00570 323 575 Peroxidase AT5G05340 58.431 9.17e-96 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00570 K00430 - gmx:100816056 555.444