Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00569 ATGGCACTTTCTCCTATTCGTTCTTCTTCTTCTTCTTTTTCTTTGTCTTCATCAGCTATTGTTGCAATATTAGCTGTGTTAGTTCTTCTCACAGGGACCTCTTCAGCTAACCTCTCAAAGAGCTTCTATTCCAAGACATGTCCCAACGTTTTCAACACTGTAAAATCTGTTGTTAAATCTGCTGTGGCCAAAGAACCTCGCATTGGAGCTTCTATTGTTCGCCTCTTCTTCCATGACTGCTTTGTTAATGGCTGTGATGGATCATTACTACTTGATGACACTCCAAACTTTCAAGGAGAGAAGACTGCAGCTGCTAACAACAATTCAGTGAGAGGTTTTGAAGTAATTGATGATATCAAGTCTAAGGTCGAGGAAAAATGCCCCGGTGTGGTCTCATGTGCTGATATCTTGTACATTGCTTCTCGTGACTCTGTTGTTCTTCTTGGAGGGCCATTTTGGAAAGTTAAACTTGGAAGAAGGGATTCCAGAACTGCCAACTTCACTGCTGCTAACACTGGTGTTATTCCACCTCCCACATCTAACCTCACCAACCTTATCACAAGGTTTCAAGATCAAGGACTCTCTGCTAGGGACATGGTTGCCTTATCTGGATCTCACACAATTGGCAAAGCAAGGTGTACTAGTTTCAGAGATCGCATATACAATCAAACGAACATTGGCAGAACATTTGCATTGGCCAGGCAGAGGAGGTGCCCTAGAACTAATGGCACAGGTGACAACAATCTTGCAAATCTAGACTTCAGAACTCCAAATCATTTTGACAACAACTACTTCAAGAACCTCCTCATCAAAAGGGGACTCCTGAATTCTGATCAAGTGCTTTTCAATGGTGGATCTACTGATTCACTGGTCAGAACTTACAGCCAGAATAACAAGGCCTTTGATTCTGACTTTGTTACAGGAATGATTAAGATGGGAAATATCAAACCCTTAACTGGGTCACAAGGGGAGATTAGGAAGAACTGCAGGAGAGTGAATTAA 1002 0.4212 MALSPIRSSSSSFSLSSSAIVAILAVLVLLTGTSSANLSKSFYSKTCPNVFNTVKSVVKSAVAKEPRIGASIVRLFFHDCFVNGCDGSLLLDDTPNFQGEKTAAANNNSVRGFEVIDDIKSKVEEKCPGVVSCADILYIASRDSVVLLGGPFWKVKLGRRDSRTANFTAANTGVIPPPTSNLTNLITRFQDQGLSARDMVALSGSHTIGKARCTSFRDRIYNQTNIGRTFALARQRRCPRTNGTGDNNLANLDFRTPNHFDNNYFKNLLIKRGLLNSDQVLFNGGSTDSLVRTYSQNNKAFDSDFVTGMIKMGNIKPLTGSQGEIRKNCRRVN 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00569 333 PANTHER PEROXIDASE 72-RELATED 35 332 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo1g00569 333 ProSitePatterns Peroxidases proximal heme-ligand signature. 198 208 IPR019793 -
Pumo1g00569 333 PRINTS Haem peroxidase superfamily signature 149 161 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo1g00569 333 PRINTS Haem peroxidase superfamily signature 198 213 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo1g00569 333 PRINTS Haem peroxidase superfamily signature 69 83 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo1g00569 333 PRINTS Haem peroxidase superfamily signature 253 268 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo1g00569 333 PRINTS Haem peroxidase superfamily signature 131 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo1g00569 333 ProSiteProfiles Plant heme peroxidase family profile. 37 333 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo1g00569 333 FunFam Peroxidase 176 312 - -
Pumo1g00569 333 ProSitePatterns Peroxidases active site signature. 69 80 IPR019794 GO:0004601
Pumo1g00569 333 Gene3D Peroxidase, domain 2 176 312 - -
Pumo1g00569 333 PRINTS Plant peroxidase signature 149 164 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo1g00569 333 PRINTS Plant peroxidase signature 47 66 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo1g00569 333 PRINTS Plant peroxidase signature 71 91 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo1g00569 333 PRINTS Plant peroxidase signature 197 209 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo1g00569 333 PRINTS Plant peroxidase signature 307 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo1g00569 333 PRINTS Plant peroxidase signature 251 266 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo1g00569 333 PRINTS Plant peroxidase signature 111 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo1g00569 333 PRINTS Plant peroxidase signature 267 284 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo1g00569 333 PRINTS Plant peroxidase signature 130 140 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo1g00569 333 SUPERFAMILY Heme-dependent peroxidases 37 333 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pumo1g00569 333 Pfam Peroxidase 54 297 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo1g00569 333 CDD secretory_peroxidase 37 332 IPR033905 GO:0004601|GO:0042744
Pumo1g00569 333 Gene3D - 42 330 - -
Pumo1g00569 333 FunFam Peroxidase 41 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00569 Pumo-Chr1 8860577 8865747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00569 21 333 Peroxidase AT5G58390 65.495 8.45e-151 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00569 K00430 - gmx:100813384 580.096