Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00562 ATGGAATTCAACAAATTCAGAATCAGAAGGTATGAGGGGCAATCTGATAGGGCTCAAGTGGAAGATCTTGAGAGAAGATGCGAGGTAGGGCCATCAGAAAGCGTGTTTCTCTTCACAGACACTATGGGTGACCCCATTTGTAGGATCCGGAACAGTCCCATGTACATGATGCTGGTGGCAGAGTTGGACAATGAATTGGTTGGTGTCATTCAAGGGTCTATAAAAGTGGTCACGGTTCATGGCCATCCTCCAAAGGATTTGGCAAAGGTGGGGTATGTACTTGGCCTAAGGGTATCACCCCATCATAGGAGAAAAGGGATTGGCTCAAGCCTTGTGAGAAGGCTAGAGGAATGGTTCACTTCCAAGGATGTGGACTATGCATATATGGCAACAGAGAAAGACAACCATGCCTCAGTGAGTCTCTTCATGGACAAGTTTGGCTACACCAAGTTTAGGACTCCAGCCATTCTTGTGAACCCTGTGAACCATCATTGCTTTCAAATATCATCCAACATTGAGATAGCCAGGTTGAAGGTTGACCAAGCTGAGTACCTCTATAGAAGATTCATGGGGTCCACAGAGTTCTTCCCCAATGACATAGGCAATATACTTAGGAACAAGCTGAGCTTGGGGACATGGGTGGCCTATTTCAAAGGAGATATTGCTTGGGGTGATTTTGGGTCAGATGGACAAGTCCCAAATAGTTGGGCCATGCTTAGTGTATGGAACAGTGGGGAGATTTTCAAGCTAAGGCTAGGGAAAGCACCTTTTTCTTGCTTGGTATGCACCAAGAGTTGGTGGTTGATTGATAAGATCTTCCCATGTTTGAAATTGCCTACCATACCTGATTTCTTCAACCCATTTGGGTTCTATTTCATGTATGGGGTGCACCATGAAGGGCCATTCTCAGGGAAGCTAGTGAGGGCCTTGTGCCAATTTGTGCACAACATGGCTGCTGAGTCCAAGGATGAGAATTGCAAGATCATAGTGACTGAAGTTGGAGGAAGAGATGAGCTCAACCACCATATCCCACATTGGAAATTGCTCTCATGCCCGGAGGACTTGTGGTGCATAAAGGCGTTGAAAAATGAAGGGACAAATAACAAGTTCCATGAATTAACCAAAACCCCACCAACAAGAGCTCTTTTTGTAGACCCAAGAGAGGTTTAA 1170 0.4547 MEFNKFRIRRYEGQSDRAQVEDLERRCEVGPSESVFLFTDTMGDPICRIRNSPMYMMLVAELDNELVGVIQGSIKVVTVHGHPPKDLAKVGYVLGLRVSPHHRRKGIGSSLVRRLEEWFTSKDVDYAYMATEKDNHASVSLFMDKFGYTKFRTPAILVNPVNHHCFQISSNIEIARLKVDQAEYLYRRFMGSTEFFPNDIGNILRNKLSLGTWVAYFKGDIAWGDFGSDGQVPNSWAMLSVWNSGEIFKLRLGKAPFSCLVCTKSWWLIDKIFPCLKLPTIPDFFNPFGFYFMYGVHHEGPFSGKLVRALCQFVHNMAAESKDENCKIIVTEVGGRDELNHHIPHWKLLSCPEDLWCIKALKNEGTNNKFHELTKTPPTRALFVDPREV 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00562 389 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 4 389 - -
Pumo1g00562 389 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 8 152 IPR016181 -
Pumo1g00562 389 CDD NAT_SF 57 128 - -
Pumo1g00562 389 Gene3D - 8 155 - -
Pumo1g00562 389 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 6 162 IPR000182 GO:0016747
Pumo1g00562 389 Pfam Acetyltransferase (GNAT) family 47 148 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00562 Pumo-Chr1 8599334 8600880 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Pumo1g00562 Acetyltransf_1 7.7e-17 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00562 - - gmx:100799507 793.882