Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00560 ATGGCGGAGTGCGTGACGGACTTGGCTCAGGCTGCCGCGTGCCGCAACGGCACTGCCGCGGCACACCTGAAGGTGATTTCCGTCTTCTCGATTTTCGTGACTAGCATGACGGGCGTATCGGCGCCCGTCATGCTGGCACGATATTTTCAGGGAAAGTCTCTCTATGACATGGCCATCTTGGTGATCAAATGCTTCGCCGCCGGTGTAATTCTTGCAACCTCATTGGTCCACGTTTTGCCGGACGCCTTTGCGGCACTCTCTGACTGCCAGGTGGCATCGCAGCATCCCTGGAAGGACTTTCCTTTCGCTGGCCTGGTGACCCTGTGTGGAGTTCTAATGGCACTGGTGGTAGACACTGTTGCTAGCTCGCACATGGAGCACGCGAACTACAAGCCGGTGGAGACGCAGGAGAAGGAGGGCACGTGGAGCATTGAGTTGGTTAGTGGTGGTGGTGGTGGTGAAGTGCAGAGGGTTGAAGAGTTGATGAGGTTGAAGCAGAGACTGGTGTCGCAGGTGTTAGAGATTGGGATAATATTTCACTCTGTTATCATAGGAGTCACTATGGGGATGTCTCAGAACGTTTGCACCATTCGGCCACTCGTTGTTGCTTTGGCCTTTCATCAGATTTTCGAAGGCTTGGGTCTTGGTGGCTGCATTGCTCAGGCCGGATTTAGCTTTGGAACAACAGCTTACATGTGCTTCATGTTCTCTGTGACAACACCAATGGGGATAATTTTGGGGATGGTGTTATTCTCAATGACTGGTTATGATGATACTAACCCTGAGGCTTTGATCATGGAAGGGTTACTAGGTTCAGTTTCTTCAGGGATACTAATTTACATGGCTCTTGTTGACCTCATAGCTGTTGATTTCTTTCATAACAAGCTTATGAACTCCAATGTGTGGTTGAAAAAGGTGTCTTTTATTGCATTAACTCTTGGCTCTGCTTCAATGTCTGTTCTCGCGCTCTGGGCCTGA 978 0.5031 MAECVTDLAQAAACRNGTAAAHLKVISVFSIFVTSMTGVSAPVMLARYFQGKSLYDMAILVIKCFAAGVILATSLVHVLPDAFAALSDCQVASQHPWKDFPFAGLVTLCGVLMALVVDTVASSHMEHANYKPVETQEKEGTWSIELVSGGGGGEVQRVEELMRLKQRLVSQVLEIGIIFHSVIIGVTMGMSQNVCTIRPLVVALAFHQIFEGLGLGGCIAQAGFSFGTTAYMCFMFSVTTPMGIILGMVLFSMTGYDDTNPEALIMEGLLGSVSSGILIYMALVDLIAVDFFHNKLMNSNVWLKKVSFIALTLGSASMSVLALWA 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00560 325 NCBIfam ZIP zinc/iron transport family 9 325 IPR004698 GO:0005385|GO:0016020|GO:0071577
Pumo1g00560 325 Pfam ZIP Zinc transporter 164 322 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Pumo1g00560 325 Pfam ZIP Zinc transporter 22 134 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Pumo1g00560 325 PANTHER ZINC/IRON TRANSPORTER 20 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00560 Pumo-Chr1 8222164 8224297 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00560 1 325 Inorganic Solute Cotransporters AT2G30080 65.507 1.63e-157 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00560 K14709 - gmx:100802186 584.719