Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00533 ATGAATTTGAATCCAAATGAAACTATGTTCCTCTCAATTACGACACTGGATGAAGCGACAGACAGGTACATGGTATGCCTTGCTGCGCCACCCCATATTGTTTCAGATGGTTTATGGGGTGGTAGCGCAGCAAATAGGAAACCAATGAAATCTTTTCTCCCATTGTTTGAGTTACAGGTCCTTTTAATATTTGCCGTCACCCAAATCTGCCGTCTCCTCCTCAAGCCATTGGGACTCCCTATGTTTATTTCACAAATGATGGCTGGCCTAATTCTACAAGCTTTTTTTGTGGTGGAACCATTGGGCACATACATGAGGCTGTTGTTTCCGTATGGAACTCACGACACCATTACAACAGTATCATCAATTGGTTTTGTACTGTTCATATTTATAAACGGTGTACAGATGGATTTTGGGTTGATAACAAGGATGGGAAAGAGGGCATGGACCATTGCCATATCCGGATTGGTAGTACCCATATTTAGTGCCATTTCAATACTAAACTTATTTCCGGATCGATCATATGCCCTCATTGGAGGAGACTACGATGATTTTGTTGTTGCATTGGTCTCTCACACTGTAATTTCATTTGCGGTCATTGCTTCCCTGCTTAATGAACTTCAAATCCAAAACTCCGAACTTGGGAAATTGGCATTGTCTTCAGCATTGGTGAGTGACGTATTGTGCACAGTCGTTACCGCCTCCGGCACTGCACTTATGGTATCTGATGATTCTAATGTCAAAGAGATTATAAGAAACTTGTTCGCTTTGATATCCATGAGTATCTTTGTTCCATTAGTGTGTCGGCCAGCAATGTTTTGGATCATCAAACATACCCCAGAAGGAAGACCTGTGAAGGATGGTTACGTTTATGTCATCATCGTACTGCTCTTTATTTTAGGTTGGCTTTCGGTTAAAATAAATCAAGAATTCGTGCTTGGAGCTTTCATTTTGGGATTGGCTGTGCCAGAAGGAGCTCCACTAGGATCTGCATTGGTTAAGAAGCTCAATTTCTTTGGTACCACCTTCCTTTTGCCAATCTTCGTGACTACGTGCATGTTGAAAGCAGATTTTTCAACCACTTATTCATCCGAATCAGTTATGACTATCAGTACCGTGGTGTTCCTCACCCACTTAGTTAAAATCATAGCATGCATTCTACCTGCCCTCTATTGCAACATGCCCCTCCGTGATGCTCTCTCTCTTGCACTCATTTTGAACACCAAAGGCGTTGTGGAAATTGGCCTCTACTGCTTCTTATACGACAACAAGGTAATCGATGGGCTAACATATGGAGTAATGATGGTGAGCATAGTGGTGATAGCATGCATTGTGCAATGGTCTGTCAAGTTTTTGTATGATCCTTCAAGAAAATTCGCTGGATACCAGAAGAGGAACATAATGAGTTTAAAACCCTGGTCTGAGCTGAGGATACTGGTGTGCATTCATAAACCAATTCACATATCGTCAATGATAGATGTGCTTGACCTGTGTTGTCCAACAGCAGAAAGTCCAATCGTTGTGGATGTCTTGCATCTAATAGAGCTAGTTGGACGTGCCCTACCCATATTCATTCCCCATCGCCTTCAAAGGCAAGCATCAGGGATGCAGCACAAGTCATACTCTGATGATGTCATTCTTACTTTTGACATTTATGAGCATGACAACCCACATGCGGTATCTGCATACCCTTGCACCGCAATAGCTCCACCCAACCTCATGTACGAAGATGTTTGCAACCTTGCCTTTGACAAAGTTGCATCCATCATCATTCTTCCATTTCATCAAAGATGGTCCACCGATGGGGATGTTCAATTTGATGACAAGAGCACAAGGGCACTCAATTGTAGGGTCCTAGAAATAGCTCCATGCTCGGTTGGGATCCTTGTCACTCGTGCTTCCCACCAGATTAGAGATTCAACCACTCGATTAGCCATGATTTATTTGGGTGGACATGATGATGAAGAGGCCTTGTGCATAGCTAGGAGAGCAATTAGGAACCCGGGGGTGGACCTTGTGGTTTACCACCTTGTTTATAATAATGATATTGCTGCAGATCATCATCATCAGTCATGGGGGCATGCACATGATCATGATGATCATAATGATGAGCTTGAAGATATTAAGCATGCATGCGCACATGCACATAATATAAGGTATCAACAAATCATAACAACGGAAGGATCCCAAACAGCTGCTTTTCTTAGTGACATAGTGAAAGAGCATGACTTCTTTATAGTTGGGAGGCGCCATGGGATCGAATCCCCTCAAACCGATGGACTTACAAACTGGAGTGAATTCCCAGAATTAGGTGTCATCGGTGATTTTCTTGCTTCCCCAGATTTGGAGAGCCGTGCATCAATTTTGGTCGTGCAACAACAACTCTCGCCCAAGCCACATTCTGGCTGGTTATTTTAA 2418 0.4297 MNLNPNETMFLSITTLDEATDRYMVCLAAPPHIVSDGLWGGSAANRKPMKSFLPLFELQVLLIFAVTQICRLLLKPLGLPMFISQMMAGLILQAFFVVEPLGTYMRLLFPYGTHDTITTVSSIGFVLFIFINGVQMDFGLITRMGKRAWTIAISGLVVPIFSAISILNLFPDRSYALIGGDYDDFVVALVSHTVISFAVIASLLNELQIQNSELGKLALSSALVSDVLCTVVTASGTALMVSDDSNVKEIIRNLFALISMSIFVPLVCRPAMFWIIKHTPEGRPVKDGYVYVIIVLLFILGWLSVKINQEFVLGAFILGLAVPEGAPLGSALVKKLNFFGTTFLLPIFVTTCMLKADFSTTYSSESVMTISTVVFLTHLVKIIACILPALYCNMPLRDALSLALILNTKGVVEIGLYCFLYDNKVIDGLTYGVMMVSIVVIACIVQWSVKFLYDPSRKFAGYQKRNIMSLKPWSELRILVCIHKPIHISSMIDVLDLCCPTAESPIVVDVLHLIELVGRALPIFIPHRLQRQASGMQHKSYSDDVILTFDIYEHDNPHAVSAYPCTAIAPPNLMYEDVCNLAFDKVASIIILPFHQRWSTDGDVQFDDKSTRALNCRVLEIAPCSVGILVTRASHQIRDSTTRLAMIYLGGHDDEEALCIARRAIRNPGVDLVVYHLVYNNDIAADHHHQSWGHAHDHDDHNDELEDIKHACAHAHNIRYQQIITTEGSQTAAFLSDIVKEHDFFIVGRRHGIESPQTDGLTNWSEFPELGVIGDFLASPDLESRASILVVQQQLSPKPHSGWLF 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00533 805 PANTHER CATION/H + ANTIPORTER 32 794 - -
Pumo1g00533 805 Pfam Sodium/hydrogen exchanger family 61 446 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Pumo1g00533 805 Gene3D - 56 459 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00533 Pumo-Chr1 7180845 7183659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00533 1 794 Antiporter Super Family AT5G22900 35.183 3.88e-153 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00533 K26731 - gmx:100785062 1343.18