Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00530 ATGTGTTCAGTGATCATCAATATGAGAATGTTGCCTGTTTGCTCAGCCACCCCAAGTTATTCCACATCTTCCCAGATTCCCTTGTTTGGGGGATTACACCCAATTCGAAAGGATCTTGAGAGCAGATATGTGGCTGAAGAAGGTGTACATTTGGCTTCACAATATGGAACTCATTCACTGAGAAATTCATTTGCAGTGCAAGCTACAAAGGCAACAAGTGAACCAGGATACCTTACAAGCACATGGGGTTATTCACCAGTGACAACAGATGGGCCTTATTCACTGAGTAATGGGGAAGTCAGACATATGGAAAGTTATCATTTATCTACTGTGCCAGACGAATTTGCGGACTTTGCAGAACAGGCAACTGAAGGATCTAATACATTAGTGACACCAGCACAACCAGAAACACTATCGACTACTGATATAATGCCAGAGAACTTTGCACCAAGGTCTAGTTCAATTAATGTGGACAATGAATCATTAGCCAGTACAAAAGCAAGTGTTGGAGACCTTGTTGCCGGGATCAATGAATCATTCAATGCCTCAATCAATAAGGGAGAAAATGCTTTACGAAGCTCACTGGATACAGCCACTTCTTTTGTAGATTCTATTGTTAAAACTGCTACTAAATCTGTAGATAATGCTTTTAGTAAGGCATTTTCTGCTGTTGATCAAACAGGGGAATTAGCAAATAAGAAATTAACCAGCTTTTCAAGTGAGCTGACTGGAGTCACAAATAAAGCACCTGCTGTGGCTATTGATGTGTTGCGCCGCACAATTGTAGTGGTAGAGAGTTCTCTAACAAGTGGTGCTTCCTATGTTGTCTACTTATATGGCTCAGCCAAGGAGCTCCTTCCCGCAGGGATTAGGGATACAGTCAATGTATATGAAGATAAAGCAACAGAAATCTTGAGGCCTGTTGGGTCTGCAACTCAAAGGATATACATGGCTGTCTATTCATTGGAGAAGAGTCTTGGCTTGGATCCTAATGACCCAATCATTCCATTTATTGTTCTTGTTGGCTCTTCAGCCACATTATGGGCCTTTTATTGGTTGTGGACATATGGAGGTTACTCAGGAGATTTGTCCCCTAAATCAGCTTTCCAGCTTTTGGCTGAGGACGCAAATGCTGCACTTATTGATGTCCGTTCTGAGGAAATGCGAGAAAAAGATGGCATTCCTGATCTCCGACGGGCTGCTAGGTTTCGTTATGCAAGTATAACTCCTCTTGAGGTTGATGGCTCCATACGCAAGTTGTTGAAGAGTGGTCGAGACCTCGATGATTCCTTGATTGCTGCTATTATTCGAAATTTGAAGATTGTTAAGGACAGTTCCAGGGTTATAGTGTTGGATGCTGATGGTACTCGTTCTAAAGGCATTGCAAGATCCTTGAAGAAAATTGGGGTCAAGAATCCATACTTGGTTCAAGGTGGCTTTCAGTCTTGGATGAAACAAGGTCTCCGCATCAAGGAACTCAAACCTGAGACAGCACTTTCCATACTCAATGAGGAAGCTGAAGCAATTCTGGAGGATGTTAGTCCTTCTCCTTGGCAACTTTTAGGTTATGGTACGGTACTTATTGCAGGGATGTATGCATTATTAGAGTGGGAGAAGACATTACAGTTAATTGGTGCATTTGGCCTCAGTTTGACCATCTATTTGCGGGTTTCTTCATATGAAAACTCAGAAGATCTAAATCAAGATGTGAGGTTGTTGCTTTCTCCTGTTAGACTTGGAGCTCAAGCATTTTCATGGGCTGCTGGAAAATTAGAATCAAATGGCTTAGGATTGCCTACATCACCTTCATCATCAGATGTTCAGAACCGGGTGTTGCAGGCTGCTGCCAAACATGAATCCCAACCATCTGATAGTGAAGGTAACCAAGATCCAGTTCCTGAACCGACGGTTCCTCTCAATCAGAATGTATGA 1932 0.4244 MCSVIINMRMLPVCSATPSYSTSSQIPLFGGLHPIRKDLESRYVAEEGVHLASQYGTHSLRNSFAVQATKATSEPGYLTSTWGYSPVTTDGPYSLSNGEVRHMESYHLSTVPDEFADFAEQATEGSNTLVTPAQPETLSTTDIMPENFAPRSSSINVDNESLASTKASVGDLVAGINESFNASINKGENALRSSLDTATSFVDSIVKTATKSVDNAFSKAFSAVDQTGELANKKLTSFSSELTGVTNKAPAVAIDVLRRTIVVVESSLTSGASYVVYLYGSAKELLPAGIRDTVNVYEDKATEILRPVGSATQRIYMAVYSLEKSLGLDPNDPIIPFIVLVGSSATLWAFYWLWTYGGYSGDLSPKSAFQLLAEDANAALIDVRSEEMREKDGIPDLRRAARFRYASITPLEVDGSIRKLLKSGRDLDDSLIAAIIRNLKIVKDSSRVIVLDADGTRSKGIARSLKKIGVKNPYLVQGGFQSWMKQGLRIKELKPETALSILNEEAEAILEDVSPSPWQLLGYGTVLIAGMYALLEWEKTLQLIGAFGLSLTIYLRVSSYENSEDLNQDVRLLLSPVRLGAQAFSWAAGKLESNGLGLPTSPSSSDVQNRVLQAAAKHESQPSDSEGNQDPVPEPTVPLNQNV 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00530 643 SMART rhod_4 364 489 IPR001763 -
Pumo1g00530 643 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 347 490 IPR036873 -
Pumo1g00530 643 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 10 640 IPR044690 GO:0009704|GO:0071277|GO:0090333
Pumo1g00530 643 ProSiteProfiles Rhodanese domain profile. 374 492 IPR001763 -
Pumo1g00530 643 CDD RHOD 369 483 - -
Pumo1g00530 643 MobiDBLite consensus disorder prediction 597 643 - -
Pumo1g00530 643 Gene3D - 359 513 IPR036873 -
Pumo1g00530 643 Pfam Rhodanese-like domain 368 485 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00530 Pumo-Chr1 7145671 7153648 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00530 336 453 Sulfurtransferasese or Rhodanese AT5G23060 29.365 4.32e-12 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00530 - - gmx:100786123 1182.16