Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00514 ATGTGTTCAGTGATCATCAATATGAGAATGTTGCCTGTTTGCTCAGCCACCCCAAGTTATTCCACATCTTCCCAGATTCCCTTGTTTGGGGGATTACACCCAATTCGAAAGGATCTTGAGAGCAGATGTGTGGCTGAAGAAGGTGTACATTTGGCTTCACAATATGGAACTCATTCACTGAGAAATTCATTTGCAGTGCAAGCTACAAAGGCAACAAGTGAACCAGGATACCTTACAAGCACATGGGGTTATTCACCAGTGACAACAGATGGGCCTTATTCACTGAGTAATGGGGAAGTCAGACATATGGAAAGTTATCATTTATCTACTGTGCCAGACGAATTTGCGGACTTTGCAGAACAGGCAACTGAAGGATCTAATACATTAGTGACACCAGCACAACCAGAAACACTATCGACTACTGATATAATGCCAGAGAACTTTGCACCAAGTTCTAGTTCAATTAATGTGGACAATGAATCATTAGCCAGTACAAAAGCAAGTGTTGGAGACCTTGTTGCCGGGATCAATGAATCATTCAATGCCTCAATCAATAAGGGAGAAAATGCTTTACGAAGCTCACTGGATACAGCCACTTCTTTTGTAGATTCTATTGTTAAAACTGCTACTAAATCTGTAGATAATGCTTTTAGTAAGGCATTTTCTGCTGTTGATCAAACAGGGGAATTAGCAAATAAGAAATTAACCAGCTTTTCAAGTGAGCTGACTGGAGTCACAAATAAAGCACCTGCTGTGGCTATTGATGTGTTGCGCCGCACAATTGTAGTGGTAGAGAGTTCTCTAACAAGTGGTGCTTCCTATGTTGTCTACTTATATGGCTCAGCCAAGGAGCTCCTTCCCGCAGGGATTAGGGATACAGTCAATGTATATGAAGATAAAGCAACAGAAATCTTGAGGCCTGTTGGGTCTGCAACTCAAAGGATATACATGGCTGTCTATTCATTGGAGAAGAGTCTTGGCTTGGATCCTAATGACCCAATCATTCCATTTATTGTTCTTGTTGGCTCTTCAGCCACATTATGGGCCTTTTATTGGTTGTGGACATATGGAGGTTACTCAGGAGATTTGTCCCCTAAATCAGCTTTCCAGCTTTTGGCTGAGGACGCAAATGCTGCACTTATTGATGTCCGTTCTGAGGAAATGCGAGAAAAAGATGGCATTCCTGATCTCCGACGGGCTGCTAGGTTTCGTTATGCAAGTATAACTCCTCTTGAGGTTGATGGCTCCATACGCAAGTTGTTGAAGAGTGGTCGAGACCTCGATGATTCCTTGATTGCTGCTATTATTCGAAATTTGAAGATTGTTAAGGACAGTTCCAGGGTTATAGTGTTGGATGCTGATGGTACTCGTTCTAAAGGCATTGCAAGATCCTTGAAGAAAATTGGGGTCAAGAATCCATACTTGGTTCAAGGTGGCTTTCAGTCTTGGATGAAACAAGGTCTCCGCATCAAGGAACTCAAACCTGAGACAGCACTTTCCATACTCAATGAGGAAGCTGAAGCAATTCTGGAGGATGTTAGTCCTTCTCCTTGGCAACTTTTAGGTTATGGTACGGTACTTATTGCAGGGCTGTATGCATTATTAGAGTGGGAGAAGACATTACAGTTAATTGGTGCATTTGGCCTCAGTTTGACCATCTATTTGCGGGTTTCTTCATATGAAAACTCAGAAGATCTAAATCAAGATGTGAGGTTGTTGCTTTCTCCTGTTAGACTTGGAGCTCAAGCATTTTCATGGGCTGCTGGAAAATTAGAATCAAATGGCTTAGGATTGCCTACATCACCTTCATCATCAGATGTTCAGAACCGGGTGTTGCAGGCTGCTGCCAAACATGAATCCCAACCATCTGATAGTGAAGGTAACCAAGATCCAGTTCCTGAACCGACGGTTCCTCTCAATCAGAATGTATGA 1932 0.4249 MCSVIINMRMLPVCSATPSYSTSSQIPLFGGLHPIRKDLESRCVAEEGVHLASQYGTHSLRNSFAVQATKATSEPGYLTSTWGYSPVTTDGPYSLSNGEVRHMESYHLSTVPDEFADFAEQATEGSNTLVTPAQPETLSTTDIMPENFAPSSSSINVDNESLASTKASVGDLVAGINESFNASINKGENALRSSLDTATSFVDSIVKTATKSVDNAFSKAFSAVDQTGELANKKLTSFSSELTGVTNKAPAVAIDVLRRTIVVVESSLTSGASYVVYLYGSAKELLPAGIRDTVNVYEDKATEILRPVGSATQRIYMAVYSLEKSLGLDPNDPIIPFIVLVGSSATLWAFYWLWTYGGYSGDLSPKSAFQLLAEDANAALIDVRSEEMREKDGIPDLRRAARFRYASITPLEVDGSIRKLLKSGRDLDDSLIAAIIRNLKIVKDSSRVIVLDADGTRSKGIARSLKKIGVKNPYLVQGGFQSWMKQGLRIKELKPETALSILNEEAEAILEDVSPSPWQLLGYGTVLIAGLYALLEWEKTLQLIGAFGLSLTIYLRVSSYENSEDLNQDVRLLLSPVRLGAQAFSWAAGKLESNGLGLPTSPSSSDVQNRVLQAAAKHESQPSDSEGNQDPVPEPTVPLNQNV 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00514 643 SMART rhod_4 364 489 IPR001763 -
Pumo1g00514 643 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 347 490 IPR036873 -
Pumo1g00514 643 ProSiteProfiles Rhodanese domain profile. 374 492 IPR001763 -
Pumo1g00514 643 CDD RHOD 369 483 - -
Pumo1g00514 643 Gene3D - 359 513 IPR036873 -
Pumo1g00514 643 MobiDBLite consensus disorder prediction 597 643 - -
Pumo1g00514 643 Pfam Rhodanese-like domain 368 485 IPR001763 -
Pumo1g00514 643 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 10 640 IPR044690 GO:0009704|GO:0071277|GO:0090333
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00514 Pumo-Chr1 6799361 6807300 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00514 336 453 Sulfurtransferasese or Rhodanese AT5G23060 29.365 4.28e-12 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00514 - - gmx:100786123 1189.1