Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00474 ATGTGGGGCAAGATACTCAAATCCATAAGGAAAAGTCTCACAAGCCTTCAACAGAGGTTTATGAATTCTCGAAAGAGTGAAATTGATAGTAGTGTGTCAGTGCAGTGGGCAAATTGCAATTGTTGCATAGAGGAAAGCAAACAATGCAATTGTGACCACATTATTGCCGCAGAAGACGCCAATGTCGACGCCCAGCGTCATGCTAACGCCAATAGTTCTTTTACTCATGCTGTCATCAACATGGTGGGGATGCTCATAGGTCTGGGGCAACAGTCAACTCCATATGCTGTAGAAAATGGAGGGTGGTCATCTGCATTCTTGCTTATGGGACTAGGGGTGATGTGTGCTTATAGTTCTCACATACTTGGAATATGCCTTAGAAAGAATCCCAAGTTAAGAAGTTTCGTGGATATTGGGAAGCATGCATTTGGATCAAAAGGAAGAAACGTGGCTGCAACAATCATCTACATGGAAATCTTCATGTCCCTGGTTTCCTACACCATCTCATTACATGATAATTTGATCACAGTGTTTTTGGGGACAAATTTGAAGCTGCACTTGCCTAACGTTTCTTCATCCCAGCTCCTAACTGTGGTGGCAGTCTTGATTGCTCTGCCTAGTTTGTGGATCAGAGACCTCTCTTCCATATCTTTCCTTTCAAGTGTTGGTATTCTCATGTCTCTGCTCATTTTCTTGTGTGTAGCAGCCACTGCACTTTTAGGACATGTCCACTCTAATCATACCATACCTGTCCTCCACCTCCATAATATTCCATCAGTATCTGGCCTTTACGTCTTCGGCTACGGAGGACATATTGTTTTCCCTGAATTATATACAACCATGAAAGACCCCTCCAAATTTACTAAGGTATCTATTGTGAGCTTCGCAGTAGTTACAGCAATTTACACGACATTGGGGTTCATGGGTGCGAAGATGTTTGGTAAGGATGTAAAGTCTCAGATCACGCTTAGCATGCCACCAGAGCACATTGTAACAAAGATTGCTCTGTGGGCAACCGTGGTGGCACCCATGACCAAATATGCGCTTGAATTCACCCCATTTGCAATTCAATTAGAGCATGCACTTCCAAGTTCCATGAGTGGCAGAACCAAAATGATAATTAGGGGCTGCGTAGGTTCATTTTCGCTTTTGGTCATACTAGCCCTTGCTCTCTCGCTTCCATATTTTGAGCATGTACTAAGTCTCACTGGTTCCCTTGTTAGTGTTGCCGTTTGTTTAATTTTGCCAAGTGCTTTCTACGTTAAGATATGTTGGGGTCAGATATCAAACCCTCTCTTACTCCTAAACCTCTTTCTCATCATATTCGGCTTTGTTCTTGCCGTGATGGGCACCATTTCCTCCTCACAGTTACTACTCAAAAATCTTCAATCTCATAACTTGAGGCACTAG 1410 0.4312 MWGKILKSIRKSLTSLQQRFMNSRKSEIDSSVSVQWANCNCCIEESKQCNCDHIIAAEDANVDAQRHANANSSFTHAVINMVGMLIGLGQQSTPYAVENGGWSSAFLLMGLGVMCAYSSHILGICLRKNPKLRSFVDIGKHAFGSKGRNVAATIIYMEIFMSLVSYTISLHDNLITVFLGTNLKLHLPNVSSSQLLTVVAVLIALPSLWIRDLSSISFLSSVGILMSLLIFLCVAATALLGHVHSNHTIPVLHLHNIPSVSGLYVFGYGGHIVFPELYTTMKDPSKFTKVSIVSFAVVTAIYTTLGFMGAKMFGKDVKSQITLSMPPEHIVTKIALWATVVAPMTKYALEFTPFAIQLEHALPSSMSGRTKMIIRGCVGSFSLLVILALALSLPYFEHVLSLTGSLVSVAVCLILPSAFYVKICWGQISNPLLLLNLFLIIFGFVLAVMGTISSSQLLLKNLQSHNLRH 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00474 469 PANTHER AMINO ACID TRANSPORTER 65 452 - -
Pumo1g00474 469 Pfam Transmembrane amino acid transporter protein 71 453 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00474 Pumo-Chr1 6352477 6355245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00474 39 462 Amino Acid or Auxin Permease AAAP Family AT5G16740 60.941 4.32e-171 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00474 - - gmx:100790897 824.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00474 1 6352477 6355245 Pumo1g00474 1 6352477 6355245 ECH