Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00430 ATGGAAGAGGAAATCAAGTCCGAATTCAAAAGAAGTGGTTTCGGCCTCGAAGACGAAGAAGAAATTTTCAGCAAATGTGTGACTTTCTGCATCAACTACAGTCTCACTCCTTTGGATCTCGTCTCAAGCTGGGAAGTTTATTACCTCAACAGACAGCTGAACGAACCAATAGTACAAAATGCTGAAATTGATGGCTTTCTGTTGCATCTACAAAATGAGAAGAAAGAGGATGTGATAAGGGAAAAGGAGGAAGCTGGCTTGCATATTTACTCTATCGGAGATGTAGAAATGATCTTAAATAATGATGATGATACAAAGGACAATACTCCCGGAACTCCAATAAATCATCATCAAGATCCTTTTTCTCCTGCACCTGATACATCTTTAATGTATGAGAATGTTTTATCATCTGGAAAACTGTCAAAATCAAAACTAGTAACACCCTTTTCAAAGCGAACAGATAGGTTTGCGGTGAAATTTAGCATCAACACTGTCCCTAATGTAGAGAATGGAAAACAAGAACCTAATCATGAGAATGCTGAAAATGATGAAGATGATGTTGTTAGAAGAGTTCCACACCGTGAAAGGTGTTCATTGGTCATTCACAGATCAGGACCCAAACCAGGTTGCAGATTCATGTATGATAGAACAGAGGATAGGCTTAATGCAATAGAAAACCGACTTAGGAAACATACAAGGGCATTTGTAGCTTCTGGGCTCTATGAAGAACCAACAGACCCTACAACTGCTTCACAGAGAAGCATTTTTGCTGTTGGCATGATTTGTTGTGATGGAGAAGGCCGTTTAAATGAGAAGTCTGTCATACTGCAGAGCAGTATTGAGCATTCTGGAGGAGAATGTGTTCGCCTAGACTTACAACGTTTGAGCCATTATTCAATTTTTCCTGGCCAGATAGTTGGTATTGGAGGGCATAATCCAAGTGGGCATTGCTTTGTTGCATCTAAATTGGTGGATTCTATACCTACCTCCGTTGCTGATGAGGATTCAAATCCTTCAAAGAAGCAAGCTATTGATAAGGAGAATCAGCCAACTGATCTGCTTTGTAAACCAAGAGAGTTATCAATGATTATTGCAGCTGGCCCCTTTACTACAACAGACAATTTGTTGTTTGAGCCTCTTATAGAACTGCTGGCATATGCAAAACGAAGACCGCCACAGTTGCTTGTATTGCTAGGACCATTTGTTGACTCTGAACACCCAGACGTTAAGAAAGGAACTGTAGACATGAATTTTGATGATATATTTCGTTTTGAAATCCTGAGGAAGTTGGAAGAAGATTATGTAGAATGTGTGGGTTCGGCTACGCGTGTTCTTCTTGTTCCATCTATACGTGATGCTAACCATGATTTTGTTTTTCCTCAGCCTGCGTTGGACATCAATCTACCTGATCTCAAATCTCAGATAGACAGTCTCAGTAATCCTGGAATCTTTGAGGCAAATGAGGTTAAGGTTGGTTGCTGCACCGTGGATATTCTCAAGCAAATCAGTGGGGAGGAGATATCACGAACTGCAGATGGAAAACCCATTGATCGCTTGAGTAGACTTGCAAACCATATTCTTAACCAGCAAAGCTTCTATCCACTTTATCCTCCAGCAGAAAGTGTCCCCTTGGACTTTTCGCTTGCTCCAGAAGCCCTTCAACTCTCGTTGGTTCCAGACATACTTATCCTACCTTCAGACATCAAGTACTTTGTCAAGGTGCTTAGTAGCGAAAATGAAGGGATAAACCACACGAAATGCATAGCTGTCAATCCGGGAAGACTAGCCAAGGGAGAAGGAGGGGGAACTTTTGTTGAGCTTGATTATTGTGGGGGTTCCGACCAAATTAACGCTTCAATTGTTGGCATATGA 1872 0.4119 MEEEIKSEFKRSGFGLEDEEEIFSKCVTFCINYSLTPLDLVSSWEVYYLNRQLNEPIVQNAEIDGFLLHLQNEKKEDVIREKEEAGLHIYSIGDVEMILNNDDDTKDNTPGTPINHHQDPFSPAPDTSLMYENVLSSGKLSKSKLVTPFSKRTDRFAVKFSINTVPNVENGKQEPNHENAENDEDDVVRRVPHRERCSLVIHRSGPKPGCRFMYDRTEDRLNAIENRLRKHTRAFVASGLYEEPTDPTTASQRSIFAVGMICCDGEGRLNEKSVILQSSIEHSGGECVRLDLQRLSHYSIFPGQIVGIGGHNPSGHCFVASKLVDSIPTSVADEDSNPSKKQAIDKENQPTDLLCKPRELSMIIAAGPFTTTDNLLFEPLIELLAYAKRRPPQLLVLLGPFVDSEHPDVKKGTVDMNFDDIFRFEILRKLEEDYVECVGSATRVLLVPSIRDANHDFVFPQPALDINLPDLKSQIDSLSNPGIFEANEVKVGCCTVDILKQISGEEISRTADGKPIDRLSRLANHILNQQSFYPLYPPAESVPLDFSLAPEALQLSLVPDILILPSDIKYFVKVLSSENEGINHTKCIAVNPGRLAKGEGGGTFVELDYCGGSDQINASIVGI 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00430 623 MobiDBLite consensus disorder prediction 103 123 - -
Pumo1g00430 623 PANTHER DNA POLYMERASE 2 ALPHA 70 KDA SUBUNIT 1 609 IPR016722 -
Pumo1g00430 623 FunFam DNA polymerase alpha subunit B 1 76 - -
Pumo1g00430 623 Coils Coil 214 234 - -
Pumo1g00430 623 Gene3D - 1 66 IPR043034 -
Pumo1g00430 623 FunFam DNA polymerase alpha subunit B 511 620 - -
Pumo1g00430 623 Gene3D - 514 618 - -
Pumo1g00430 623 Gene3D - 342 510 - -
Pumo1g00430 623 Pfam DNA polymerase alpha/epsilon subunit B 363 573 IPR007185 GO:0003677|GO:0006260
Pumo1g00430 623 PIRSF DNA_pol_alpha_2 1 610 IPR016722 -
Pumo1g00430 623 FunFam DNA polymerase alpha subunit B 343 509 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00430 2 623 Core DNA Replication Machinery Family AT1G67630 60.254 0.0 754
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00430 K02321 - gmx:100795306 1089.72