Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00414 ATGGGTTTATGTTCTCTTTTTTTGGTTACACTTCTTCTGCTAACATCATACGCGGTTTGCCAACTTGAAGAATTTATCAGTATTGACTGTGGAGGGACAAGTAACTACACTGATAAAAGCACAGGGCTTGCATGGATATCAGACTCTGGGATCATGAAACATGGCAAGCCAGTGGAGGTGCAAAATCCAAGTGGAAACAAGGTTCAGTATCAGAGACGCCGAGAGTTTCCTATAGACAGCAGAAAATACTGTTATACACTTGGCACTGAGGAGAGAAGAAGGTATCTAGTGCGAGCAACGTTTCAGTATGGTAGCTTGGATGATGGAGACACATACCCTCAATTTCAGCTCTATTTGGATGCAACCAAATGGGCTACTGTGTCAATATATGATGCCTCAAGAATTTATGTGAAGGAAATGATCTTCAGGGCACCCTCAAACTCTATTGATGTTTGCATGTGCTGTGCTACCACTGGTTCTCCCTTCATATCTACCCTTGAGCTAAGGCCCTTGAATCTTTCTATGTATGCCACAGATTTTGAGGGCATTTTCTTCTTGAAAGTGGCTGCAAGAATTAACTTTGGTGCTCCAAGTGAGGATGCCGTCAGGTATCCAGATGACCCATATGATAGAATTTGGGAGTCTGATCTTATTAAAAGACAAAATTATCTTGTTGGGGTGGCCCCAGGCACTGAAAGAATTAACACAACAAAGAAAATAGAAATAGAGACAAGAGAATACCCACCTGTTAAAGTGATGCAAACTGCAGTTGTTGGCACCAAAGGAATACTTAGCTATAGACTAAACCTGGAAGACTTCCCTGGCAATGCTAGAGCTTATGCATATTTCGCGGAGATTGAAGATCTGCCTAAGAATGAGACTAGAAAATTCAAATTGGAGCAACCTTACATAACTGATTATAGCAATGCAGTGGTGAACATAGCTGAGAATGCCAATGGGAGCTACACTCTCTATGAACCAAGTTACATGAATGTGAGTCTGGAGTTTGTGCTTTCATTCTCCTTTGTTAAGACCCGGGATTCCACTCAAGGTCCTCTTCTAAATGCAATGGAAATAAGCAAATATGTGCAAATTGCTTCAAAGACTGACAGGCAAGATTCAAATTTTGTAAATGCATTTCGCTTCTTATCTGCTGAAAGTGTCCTGAAGAATGAAGGTGATCCCTGTGTTCCAACTCCCTGGGAGTGGGTAAATTGTAGCACAACTACACCTCCAAGAATTACAAAGATCTTTGATGATAATCCTGAACTGCATAAAGGGAACAAGAAGCATTTTCAGTTGATGCTAGGAATTTCTATTGGAGTACTAGTGATTCTATTAATATTGTTCTTAACAAGTTTGGTGCTATTGCTTAATCTGCGGAGAAAGACATCTCAACAGAAACGTGACGAAAAGGGTATTTCTGGGCGCAGCAGCACTAAACCTTTGACTGGATACTCATTTGGTCGAGATGGGAATATAATGGATGAAGGTACTGCTTACTATATTACACTCTCAGAGTTGAAAGAAGCTACTAATAATTTTTCAAAGAAAATTGGCAAAGGAAGCTTTGGATCTGTCTACTATGGGAAAATGAAAGACGGAAAAGAGGTGGCAGTTAAGACTATGACTGATCCATCCAGCTATGGGAACCAGCAATTTGTAAATGAGGTGGCCCTCTTATCAAGAATTCATCACAGAAACTTGGTTCCTCTGATTGGATATTGTGAAGAAGAATATCAGCATATTCTGGTTTATGAGTATATGCACAATGGCACTTTAAGGGAGTACATTCATGAATGTTCGAGTCAGAAGCAATTAGATTGGTTAGCTCGCCTTCGAATTGCAGAAGATGCAGCTAAAGGTCTTGAATACTTACACACAGGATGTAATCCTAGTATCATTCACCGCGATGTGAAGACAAGCAATATTCTTCTTGACATCAATATGAGAGCAAAAGTGTCAGACTTTGGACTCTCAAGGCTAGCTGAAGAAGATTTAACCCACATATCAAGTGTTGCAAGGGGAACTGTAGGTTACCTGGATCCTGAGTACTACGCAAATCAGCAATTGACTGAAAAGAGTGACGTGTACAGTTTTGGAGTTGTTCTGCTAGAATTGATATCAGGAAAAAAGCCTGTATCGTCAGAAGACTATGGTCCTGAAATGAATATTGTTCACTGGGCAAGATCTTTAATTCGTAAAGGAGATGTGATAAGCATCATGGATCCTTCCCTTGTGGGGAATGTGAAAACTGAGTCAGTTTGGAGGGTTGCTGAAATTGCCATGCAATGTGTAGAACAACATGGTGCATGCAGGCCAAGGATGCAAGAGGTCATTTTGGCTATACAAGATGCTTCTAACATTGAAAAAGGGACAGAAAGTCAACACAAGTTATCTTCTTCAGGTGGTTCAAAGCCACAGTCTTCACGTAAGACTTTACTAGCAAGCTTTCTTGAAATTGAGAGCCCTGACTTGTCAAATAGTTGCCTCCCCTCTGCCAGATAA 2508 0.4067 MGLCSLFLVTLLLLTSYAVCQLEEFISIDCGGTSNYTDKSTGLAWISDSGIMKHGKPVEVQNPSGNKVQYQRRREFPIDSRKYCYTLGTEERRRYLVRATFQYGSLDDGDTYPQFQLYLDATKWATVSIYDASRIYVKEMIFRAPSNSIDVCMCCATTGSPFISTLELRPLNLSMYATDFEGIFFLKVAARINFGAPSEDAVRYPDDPYDRIWESDLIKRQNYLVGVAPGTERINTTKKIEIETREYPPVKVMQTAVVGTKGILSYRLNLEDFPGNARAYAYFAEIEDLPKNETRKFKLEQPYITDYSNAVVNIAENANGSYTLYEPSYMNVSLEFVLSFSFVKTRDSTQGPLLNAMEISKYVQIASKTDRQDSNFVNAFRFLSAESVLKNEGDPCVPTPWEWVNCSTTTPPRITKIFDDNPELHKGNKKHFQLMLGISIGVLVILLILFLTSLVLLLNLRRKTSQQKRDEKGISGRSSTKPLTGYSFGRDGNIMDEGTAYYITLSELKEATNNFSKKIGKGSFGSVYYGKMKDGKEVAVKTMTDPSSYGNQQFVNEVALLSRIHHRNLVPLIGYCEEEYQHILVYEYMHNGTLREYIHECSSQKQLDWLARLRIAEDAAKGLEYLHTGCNPSIIHRDVKTSNILLDINMRAKVSDFGLSRLAEEDLTHISSVARGTVGYLDPEYYANQQLTEKSDVYSFGVVLLELISGKKPVSSEDYGPEMNIVHWARSLIRKGDVISIMDPSLVGNVKTESVWRVAEIAMQCVEQHGACRPRMQEVILAIQDASNIEKGTESQHKLSSSGGSKPQSSRKTLLASFLEIESPDLSNSCLPSAR 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00414 835 ProSitePatterns Protein kinases ATP-binding region signature. 519 541 IPR017441 GO:0005524
Pumo1g00414 835 SMART serkin_6 513 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g00414 835 Gene3D Phosphorylase Kinase; domain 1 491 588 - -
Pumo1g00414 835 Pfam Protein tyrosine and serine/threonine kinase 515 780 IPR001245 GO:0004672|GO:0006468
Pumo1g00414 835 Pfam Malectin-like domain 28 361 IPR024788 -
Pumo1g00414 835 ProSiteProfiles Protein kinase domain profile. 513 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g00414 835 ProSitePatterns Serine/Threonine protein kinases active-site signature. 634 646 IPR008271 GO:0004672|GO:0006468
Pumo1g00414 835 MobiDBLite consensus disorder prediction 792 811 - -
Pumo1g00414 835 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 589 796 - -
Pumo1g00414 835 Gene3D Transferase(Phosphotransferase) domain 1 589 805 - -
Pumo1g00414 835 SUPERFAMILY Protein kinase-like (PK-like) 498 780 IPR011009 -
Pumo1g00414 835 PANTHER OS07G0107800 PROTEIN-RELATED 428 786 - -
Pumo1g00414 835 FunFam receptor-like serine/threonine-protein kinase NCRK 493 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00414 Pumo-Chr1 5838601 5844196 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00414 418 835 Receptor kinase-like Gene Family AT1G67720 70.952 0.0 561
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pumo1g00414 Malectin_like 8e-90 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00414 - - gmx:100807148 821.231