Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00407 ATGGCAGCTCTGTTACCTTGCACGCCGAACATAGTCTCTGCTCCGTTCGGGAACCGGACCACGAGCCACCTCCCGCACCGACCTCACTCCCACGCTTTCTCCGGTTCGACCACCAGACACTTTCTTCGCGGTTCGCTTACCGTATCCCGGTTCGGGTTCAAACCCGGTTTTTTGCCCGAGCCGGACGACGCTGAAGGCGTCCTCAGAGAACTGTTTGGCCGAGCGGAGGGACTTCTTTACACGATTGCCGATGCTGCCGTTTCTTCTTCCGATACGGTTGCGGTTTCCACCACCGCCACACAGAGCAACGATTGGCTTTCCGGAATTGCCAATTACATGGAGACTGTTCTCAAGGTACTCAAGGATGGGCTTTCTGCTTTGCATGTCCCATATGCTTATGGTTTTGCAATTATACTGCTCACGGTTCTTGTAAAAGCTGCCACTTTTCCATTAACCAAAAAACAGGTAGAATCTGCCTTGGCTATGCGAACTTTGCAACCTCAAATAAAGGCTATTCAGCAGCGATATGCCGGGGATCAGGAGAGAATTCAACTTGAAACTGCTCGGTTGTATAAACTAGCCAACATTAATCCTCTAGCAGGATGCCTGCCTACACTCGCAACAATACCAGTGTGGATTGGGTTATATCGCGCCCTTTCAAACGTGGCAGATGAGGGGCTCCTTACTGAAGGCTTCTTCTGGATACCTTCTCTTGCTGGTCCAACTACAGTTGCAGCTCGTCAAAATGGCAGTGGCATCTCTTGGCTTTTTCCTTTTGTGGATGGTCACCCTCCCCTTGGATGGTCAGATACATTGGCTTACCTGGTCTTGCCAGTGTTGTTGGTCGTCTCTCAGTATATCTCTGTCCAAATAATGCAGTCATCACAGCCTAATGATCCCAACATGAAAAGTTCTCAAGCCTTGACCAAGTTCCTTCCATTAATGATTGGTTACTTTGCTCTCTCAGTTCCTTCTGGTCTTAGCCTTTACTGGTTAACAAATAATATATTGAGCACTGCACAACAAGTATGGCTTCAAAAGTTAGGAGGTGCTAAAAATCCTGTGAGGCAAGTCCCAGATGATATCATAAAGAATGACCTAACACAGGTTCAGAAGTCAATATCTAAACTAAATTCCACGAAAGCGGAGGAAGCCAGACAAACTGAGAAAACATCAGAGGGGCCACGACCTGGTGAAAGATTTAAGCAAATAAAGGAGCAAGAGGCAAGGAGAAGACAGCAAAGAGAAGAAGAAGAAAAAAGGAAAGCCATGGAAGCAGCAGCTAGAGAAACTAAACTAGACGAGACACTTGAGAAAACAGTTGAAGGGGGAAATCAAACTGGAGGTGATTTAGTTGTTAAAAAATCTCGGTCAGTGGCTTCAGATACTGATCCCTCCATATCTGGAGTAGTAAATGGTAATCCATTAAGTGAAGACTCGGAGGGAAATCAGAATTCTACGTCTACATCTGAGACAGAAAATAATGAAGGTTCTACTCATTTAAACAATGTTGAGATAAACGAGAGAAATTTAGACAAGGAACCAAGAGAAGTATTAACAACTACAACCACCACAAACAAACAACCTCCTGCAGAAGAGACAAAGGATTGA 1611 0.4562 MAALLPCTPNIVSAPFGNRTTSHLPHRPHSHAFSGSTTRHFLRGSLTVSRFGFKPGFLPEPDDAEGVLRELFGRAEGLLYTIADAAVSSSDTVAVSTTATQSNDWLSGIANYMETVLKVLKDGLSALHVPYAYGFAIILLTVLVKAATFPLTKKQVESALAMRTLQPQIKAIQQRYAGDQERIQLETARLYKLANINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTVAARQNGSGISWLFPFVDGHPPLGWSDTLAYLVLPVLLVVSQYISVQIMQSSQPNDPNMKSSQALTKFLPLMIGYFALSVPSGLSLYWLTNNILSTAQQVWLQKLGGAKNPVRQVPDDIIKNDLTQVQKSISKLNSTKAEEARQTEKTSEGPRPGERFKQIKEQEARRRQQREEEEKRKAMEAAARETKLDETLEKTVEGGNQTGGDLVVKKSRSVASDTDPSISGVVNGNPLSEDSEGNQNSTSTSETENNEGSTHLNNVEINERNLDKEPREVLTTTTTTNKQPPAEETKD 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00407 536 Pfam 60Kd inner membrane protein 133 347 IPR028055 -
Pumo1g00407 536 NCBIfam membrane protein insertase YidC 133 347 IPR028055 -
Pumo1g00407 536 MobiDBLite consensus disorder prediction 374 536 - -
Pumo1g00407 536 MobiDBLite consensus disorder prediction 459 505 - -
Pumo1g00407 536 Coils Coil 401 434 - -
Pumo1g00407 536 MobiDBLite consensus disorder prediction 382 439 - -
Pumo1g00407 536 CDD 5TM_YidC_Alb3 134 347 IPR047196 -
Pumo1g00407 536 PANTHER OXA1 83 412 IPR001708 GO:0016020|GO:0032977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00407 Pumo-Chr1 5773343 5779158 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00407 17 415 Chloroplast and Mitochondria Gene Families AT2G28800 52.854 4.97e-134 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00407 K03217 - gmx:100802546 915.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00407 1 5773343 5779158 Pumo1g00407 1 5773343 5779158 ECH