Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00338 ATGGTTGCTTCAAACAAAACCAAACCCACGTTAGAAGAGGTTTTGGACATTGAGAATAACATGGCTCAGTGGGTGCTCAATCCTCCACAGCCACCTTCCATGCTGCGTCAGGTCCTCGACAACATCAAGGGCACCCTCTTACCGCATCCAAATCCAAATGCATTCTCTTCTCTCAGGAACCAACCCTTTTCCAAATGCGCCTTTGCCTTCTTGCAGGACTTGTTTCCCATTCTTGCTTCACTCCAAAACTACAATGCCCAAAAGTTCAAGTGCGATTTCATGGCCGGTCTAACTCTTGCAATCTTCGCCATTCCTCAGTGTATGGGAAATGCGACATTGGCGCAGCTAAGTCCTGAATATGGCCTCTATACAGGAATTGTCCCACCTCTTATTTATGCCATGCTGGCGAGTTCAAGGGAGATAGTGATCGGACCTGGATCTGTGGATTCACTGCTACTTTCCTCAATGATACATACATTGAAAGTTCCTATTCATGATTCTATTAGTTACACCCAACTTGTTTTCACTGTGACTTTTTTTGCGGGCATCTTTCAAGTTGCTTTCGGGCTCTTTAGGTTTGGTTTTCTGGTGGAATATCTTTCACAAGCCACGATCGTGGGGTTCTTAGCAGCAGCTGCCGTGGGCATTGGACTACAACAATTGAAAGGATTATTTGGGATCGTTAACTTTACCAACAAAACTGGTTTATTTTCCGTGGTGAAATCTCTTTGGACATCCTTCAAAAACCAATCAGCGTGGCATCCCTACAATTTTATTATTGGATTCTCATTTCTCTGCTTCATCCTATTTACCAGATTCCTGGGGAAAAGGCACAAGAAACTCATCTGGTTGTCACACGTTGCTCCACTCCTATCTGTTATTGTATCCTCTGTTATTGCATACAAATTAAACGTTAATGAGCATCACGTGAAGGACTACAAAGTTGAAGTCTTGGGACCAATTAAAGGAGGCAGCTTGAATCCAAGCTCACTCCACCAGTTAACATTTGATAGCCAAGTTGTGGGTCATTTGATCAGAATAGGCTTGACCATTGCTATTATTTCACTCACGGGATCTATTGCTGTTGGCCGATCATTTGCATCTCTAAAAGGACACAGTATTGATCCCAACAGAGAAGTGGTATCCTTGGGCATAATGAACATTGTTGGATCCTTCACATCTTGCTATATTGCATCAGGGTCTTTGTCACGTACTGCTGTAAACTACAATGCTGGCTCTGAAACAATGGTGTCGAACATAGTGATGGCGCTGACGGTGCTGGTGTCACTTAAATTTTTGACGGGGCTTTTATATTTCACTCCGAAAGCAATCCTAGCAGCAATAATTCTTTCGGCCGTACCAGGACTGATTGACCTTAACAAAGCACGTGAAATTTGGAAGGTTGATAAAATGGATTTCCTTGCTTGCACTGGAGCCTTTTTGGGAGTCTTGTTTGCATCTGCGGAAATAGGCCTTGCAATTGGGATCACGATATCATTCGCGAAGATAATTATAACCTCAATTCAACCTGCTATAGCGGTTATTGGAAGGCTTCCAGGAACGGATGCATTCGGCGATGTTCAACAATATCCAATGGCAGTCAACATTCCTGGGGTTTTGATAGTCTCTTTAAAATCTGCTTGGCTTTGTTTTGCAAATGCAAATCTTGTAGAGGAAAGGATTGAGAGATGGGTGAACAATGAAAAAGCTAAGGATGGCAAAGGAGGAGAAAGCACCTTCATACACGTCATTATTGATGCCTCAAGTCTTACGAATATTGACACCGTGGGAATTGCTTCTCTGGTGGAGCTCAACAGAAATCTGACTTCACGTGGAGTAAAGTTAGCCATCGCTAACCCTAGGTGGCATGTAATTCACAAGCTAAGATTAGCCAACTTCGTGAGCAAAATTGGAGGAAGGGTTTTCCTTTCTGTGGGAGAAGCAGTAGATGCATGTGTTGGCACTAAAATGGTTGCTGTATAA 1983 0.4317 MVASNKTKPTLEEVLDIENNMAQWVLNPPQPPSMLRQVLDNIKGTLLPHPNPNAFSSLRNQPFSKCAFAFLQDLFPILASLQNYNAQKFKCDFMAGLTLAIFAIPQCMGNATLAQLSPEYGLYTGIVPPLIYAMLASSREIVIGPGSVDSLLLSSMIHTLKVPIHDSISYTQLVFTVTFFAGIFQVAFGLFRFGFLVEYLSQATIVGFLAAAAVGIGLQQLKGLFGIVNFTNKTGLFSVVKSLWTSFKNQSAWHPYNFIIGFSFLCFILFTRFLGKRHKKLIWLSHVAPLLSVIVSSVIAYKLNVNEHHVKDYKVEVLGPIKGGSLNPSSLHQLTFDSQVVGHLIRIGLTIAIISLTGSIAVGRSFASLKGHSIDPNREVVSLGIMNIVGSFTSCYIASGSLSRTAVNYNAGSETMVSNIVMALTVLVSLKFLTGLLYFTPKAILAAIILSAVPGLIDLNKAREIWKVDKMDFLACTGAFLGVLFASAEIGLAIGITISFAKIIITSIQPAIAVIGRLPGTDAFGDVQQYPMAVNIPGVLIVSLKSAWLCFANANLVEERIERWVNNEKAKDGKGGESTFIHVIIDASSLTNIDTVGIASLVELNRNLTSRGVKLAIANPRWHVIHKLRLANFVSKIGGRVFLSVGEAVDACVGTKMVAV 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00338 660 Pfam STAS domain 530 648 IPR002645 -
Pumo1g00338 660 Pfam Sulfate permease family 89 477 IPR011547 GO:0016020
Pumo1g00338 660 NCBIfam sulfate permease 76 645 IPR001902 GO:0016020|GO:0055085
Pumo1g00338 660 CDD STAS_SulP_like_sulfate_transporter 530 643 - -
Pumo1g00338 660 FunFam Sulfate transporter 31 509 655 - -
Pumo1g00338 660 SUPERFAMILY SpoIIaa-like 536 652 IPR036513 -
Pumo1g00338 660 Gene3D STAS domain 509 654 IPR036513 -
Pumo1g00338 660 ProSiteProfiles STAS domain profile. 549 652 IPR002645 -
Pumo1g00338 660 PANTHER SULFATE TRANSPORTER 59 652 IPR001902 GO:0016020|GO:0055085
Pumo1g00338 660 ProSitePatterns SLC26A transporters signature. 118 139 IPR018045 GO:0008271|GO:0008272
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00338 Pumo-Chr1 4982762 4989154 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00338 18 657 Inorganic Solute Cotransporters AT5G10180 54.673 0.0 700
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00338 K17469 - gmx:100817841 1175.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00338 1 4982762 4989154 Pumo1g00338 1 4982762 4989154 ECH
Pumo1g00338 1 4982762 4989154 Pumo10g01576 10 20799553 20800570 ECH