Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00316 ATGGAGAAAAGAGGGAGTGTGTTGATGGAGAAGTATGAGTTTGGGAAGCTATTAGGTCAAGGAAACTTTGCGAAGGTTTACCATGCAAGGGACCTAAGAACCGGTGAGAGTGTTGCCATTAAGGTGATTGACAAGGAGAAAGTTCTAAAAATTGGGCTGGTGGATCAAACAAAGCGAGAGATATCGATTATGAGTCGGGTTAAACACCCCAATGTTTTGCAGCTTTATGAGGTCTTGGCCACCAAGGCCAAGATTTACTTCATCATAGAATATGCCAAAGGGGGTGAACTTTTCAACAAGGTAGCTAAAGGTAGACTCACTGAGGACAAGGCAAGGAAGTACTTTCAACAATTGGTCAGTGCTATTGATTTTTGCCACAGCAGGGGTGTTTATCACAGAGATTTGAAGCCAGAGAACTTGCTTTTGGATGAGAATGGAGTTCTCAAGGTAGCGGATTTTGGATTGAGTGCACTTGTTGAATCTCATCGTCAAAATGACATGCTGCATACAATTTGTGGAACTCCTGCATATGTGGCTCCTGAGGTTATAACTAGAAGGGGCTATGATGGAGCAAAAGCTGATGTATGGTCTTGTGGAGTGATCTTATTTGTTCTTTTGGCTGGTCATTTGCCATTCTATGATTTGAATCTTATGTCACTGTATAAGAAAATAGGCAAGGCAGAATATAAATGTCCAAACTGGTTTCCATTTGAAGTGCGCAGACTGTTAGCGAAAATCCTTGACCCCAACCCAAAGACCAGGATATCCATGGCAAAAGTTATGGAAAATTCGTGGTTCAGAAAAGGATTCAAACCCAAATCTGGTCAAATGAAAAGAGAGGCTGTTAATGTGGCTTTAGTTGATTCTGATCAAGTTTTTGGCTCGTGTGAGAATACAAGTGCTGCTGCTGTTGAGGCAGAGCAAGCATTGGTTAAACCTTCACATTTTAATGCCTTTGATATAATTTCTCTGTCTGCTGGGCTTGACTTGTCTGGCCTTTTTGCTGGCAATGTTGAACTGGAAGACACCAAATTTACATTCATGAGCTCTGCCTCATCCATCATGTCTACAATGGAGGACATTGCTCACATTTTGAGGATGGAGATAATGAAGAAGGATGGAGGGTTGCTGAAATTGGAGAGATCCAGGGAAGGTAGAAAAGGACCACTTTCCATTGATGCTGAAATATTTGAGGTCACCCCATCTTTCCATTTGGTCGAGTTGAAGAAGTCCTGCGGTGATACATTAGAATACCAGAAGATATTGAAGGAAGATTTAAGACCAGCTCTCAAAGATATTGTCGGTGTTTGGCAAGGTGAGCAGCATCTGCAGTAG 1335 0.4202 MEKRGSVLMEKYEFGKLLGQGNFAKVYHARDLRTGESVAIKVIDKEKVLKIGLVDQTKREISIMSRVKHPNVLQLYEVLATKAKIYFIIEYAKGGELFNKVAKGRLTEDKARKYFQQLVSAIDFCHSRGVYHRDLKPENLLLDENGVLKVADFGLSALVESHRQNDMLHTICGTPAYVAPEVITRRGYDGAKADVWSCGVILFVLLAGHLPFYDLNLMSLYKKIGKAEYKCPNWFPFEVRRLLAKILDPNPKTRISMAKVMENSWFRKGFKPKSGQMKREAVNVALVDSDQVFGSCENTSAAAVEAEQALVKPSHFNAFDIISLSAGLDLSGLFAGNVELEDTKFTFMSSASSIMSTMEDIAHILRMEIMKKDGGLLKLERSREGRKGPLSIDAEIFEVTPSFHLVELKKSCGDTLEYQKILKEDLRPALKDIVGVWQGEQHLQ 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00316 444 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Pumo1g00316 444 Pfam NAF domain 313 371 IPR004041 GO:0007165
Pumo1g00316 444 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Pumo1g00316 444 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g00316 444 ProSiteProfiles NAF domain profile. 311 335 IPR018451 GO:0007165
Pumo1g00316 444 Gene3D Transferase(Phosphotransferase) domain 1 94 272 - -
Pumo1g00316 444 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g00316 444 FunFam Non-specific serine/threonine protein kinase 2 298 - -
Pumo1g00316 444 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Pumo1g00316 444 Gene3D Phosphorylase Kinase; domain 1 8 93 - -
Pumo1g00316 444 Gene3D Kinase associated domain 1, KA1 311 437 - -
Pumo1g00316 444 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 7 431 - -
Pumo1g00316 444 SUPERFAMILY Protein kinase-like (PK-like) 8 290 IPR011009 -
Pumo1g00316 444 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g00316 444 CDD CIPK_C 317 431 - -
Pumo1g00316 444 FunFam Non-specific serine/threonine protein kinase 311 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00316 Pumo-Chr1 4753519 4756185 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00316 1 441 CBL-interacting serine-threonine protein kinases AT5G58380 60.044 0.0 573
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pumo1g00316 Pkinase 2.6e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00316 K07198 - gmx:100816254 831.632