Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00311 ATGGATTGTTGTGTGTGCACAACTATGCCATTGATATTAAGGCCTCCGAGGAATACAATATGTGGGGCTTGTTACGAAGGAGTTAGAAGCATAATCAACATGATGAGCAATGTCGAAAGTGAGAAAGTAAAAGCAATGGCTAATCCAAATCCAAACAGTTCTCCAGTTTCACGGCGAAATTCGAGTAAGACACTTGATGATTGTATAAGATGGTGTTCAGAGCAGATAGAGCAGTTTAATCAACAAAAAGAAGACCTGGTTTTCCTCAGAGGCTTTGTTGCAGCCTTCAAAGCACAGATTCACACGGATATATTGGTCAGTCCAGGCAGGCATGGTCCACCTATACCCGCACATAAGTCCGTTTTGGCAGCAAGATCAGAAATATTTAAGAACATGCTAGAGTGCGATGAATGCAAGGCAGCACCAAGTAACAGCATAAGTATACCCGATTTGAACCATGAAGAACTAGAGTCTCTCCTTGAGTTTCTGTACAGTGGGACCTTGGCAGTGGAAAAATTGGAGAAACATGTTTACGCGTTGTCACAAGCAGCTGATAAGTATGTGATCCCACATTTGCTGAAACACTGCGAACGATATCTGCTGAGTTCGCTAAGCACTTCTAATGCCCTTGAGACACTAGAGATTGCGGATACTTGTTCCAACCACAACTTGAAGGAGACAACCTTGAATTTCTTAGTTAAAAACATTGAGCATATGGTGTCCTCACCTAAATTTGAAACTTTTGTACACAGGAGTCCACACCTGACTGTGCAACTAGTTACGAGGGCCTTTGTGAATGGTGCCAAATAA 810 0.4235 MDCCVCTTMPLILRPPRNTICGACYEGVRSIINMMSNVESEKVKAMANPNPNSSPVSRRNSSKTLDDCIRWCSEQIEQFNQQKEDLVFLRGFVAAFKAQIHTDILVSPGRHGPPIPAHKSVLAARSEIFKNMLECDECKAAPSNSISIPDLNHEELESLLEFLYSGTLAVEKLEKHVYALSQAADKYVIPHLLKHCERYLLSSLSTSNALETLEIADTCSNHNLKETTLNFLVKNIEHMVSSPKFETFVHRSPHLTVQLVTRAFVNGAK 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00311 269 ProSiteProfiles BTB domain profile. 102 172 IPR000210 GO:0005515
Pumo1g00311 269 SUPERFAMILY POZ domain 88 203 IPR011333 -
Pumo1g00311 269 CDD BACK 205 245 - -
Pumo1g00311 269 SMART BTB_4 102 204 IPR000210 GO:0005515
Pumo1g00311 269 Pfam BTB/POZ domain 100 203 IPR000210 GO:0005515
Pumo1g00311 269 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED-RELATED 20 268 IPR044784 -
Pumo1g00311 269 Gene3D Potassium Channel Kv1.1; Chain A 71 204 IPR011333 -
Pumo1g00311 269 Gene3D - 205 267 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Pumo1g00311 BTB 7.7e-21 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00311 K10523 - gmx:100777561 517.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00311 1 4714460 4716408 Pumo1g00311 1 4714460 4716408 ECH