Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00302 ATGGCCGCTGTATCTGAAATTGGAAACAAGACATTGGTATGCCAAGATCCCCACAGTTTTGGTCACGTTGATATCTGGCACGCAGGCAACCCATTCGAATCCCCCACTTGTCTTCTCTTTTTGCAGGTCTCTTTGATGACCATAGTCACACAGTTAATGGACGTATGTCTCAAGCAACTAGGTCAATCCTCCCTTGTAGCCCAGATTCTTGGTGGAGTGCTGTTTGGCCCATCAATGTTGGGGAACAAAAAGATTCTGGGCCAAACCTTATTTCCTGTAAAGGGTGCTGTAGTGCTTGAAACAGTTGCATCGTTTGGCCTTATGTTCTTCTTCTTCATATGGTGTGTTAAAATGGATATTGCCACATTGTTGAAGACTGAAAAGCTGGCCATCACTCTTGGTATTTCTGTATTCTCATTTACATTGGTAATCCCTACTGGACTGGCCATGCTGTTGAAGCAATATGTTCCAATGGACCACAGCCTCGCACATGCACTGCCCTTTCTAGCTCTCTCACAAACCTTAACTGTATTCATTAGCATAGCAGTGCTCTTGACAGATCTCAAAATCCTTAACACTGATATAGGACGTATAACCATGTCAGCAGCAATGTTTGCTGATGTAGCTGGCTTTTCTATGACAGTGATTTTGTTTGCAGTACTGCAGAATAAGAGTGGTAGCTTTCTGACACTAACATTCATCCTTCTATCAATATTTGCACTCTTGCTTGTTATTATATTTGTGATGAGACCAGCAATACTTTGGATGGTAAAGCACTCAGGTGGCAGTTCGGTTAATGAAATCTGCGTTGTTTTCATCTTTCTCTTAGTTCTCTTATCTGGATTTGTCAGTGAGTTGATTGGGCAGCATTTTATTATGGGACCAATAATTTTAGGCCTGGCTATTCCAGAAGGGCCACCCTTAGGAACAGCTTTGATGAGTAAATTGGACACAATCTGTATGGCATTTCTTTATCCAATCTACCTTGCTGTAAATGGATTGCAAACTGATATCTTCAAAATTGACATGCAGTCTCTGTGGATTGTGTGTCTCATACTGATCGTGTCTTTCTTTGTAAAGATTGGTGCTGTCATGTTGCCAGGATACTATTACAATCTACCCATGAAAGAATGTTGCATCATCGGCTTCCTTCTAAATGGAAGGGGTATAGCTGAGCTTGCCATGTACAATATGTGGACGGCAGGCGAGCTACTAACGGAACAAGAGTTCTCTTTGATGGTGGCCTCCATTGTAGTAATAAATGCTATCATAGCACCACTCGTAAGATACATATATGATCCTTCAGAACAATATCAGACCGGAAGAAGATGCACAATTCAGCATACTAGACGAGATTCGGAGCTCCGAGTCATGGTGTGCATTCACAACAATGAAAACCTCCCCACAATCCTGAACCTCTTAGAAGCATCCTATGCAAGCAGAGAGAGCACGATTGAGGTTACAGCATTAGTCCTAGTGGAGCTTCATGGAAGAGCCAGGCCTATTCTTGTTGCTAACCAACCCCATGATGACCTGCGCTCAATGTCATGCAATGCAAGTCACATTGACAATGCATTGAGGCAATATGCACAACAGAATGAAGGATATGTATCTGTTCAATCTTTCACTTCAATCTCCACCTTTGAAACCGTGTATGATGATATTTGTAGAATCTCACTAGACAGTGGAGCCAACATTTTGATCTTACCATTCCACAAGAGGTGGGAAATTGATGGCACAGTTGAGATTTCACATAGGTCCATCCAAACCATGAACATCAAAGTCCTCGAAATGGCACCATGTTCTGTGGGAATTCTAGTTGATAGGGGCATCTTGAGTGCTTCTCCTTCACTCTTGACGGCTAGAGCAGCATACTATGTTGCAGTGTTCTTCATTGGTGGTGCAGATGACGCGGAGACACTAGCCTATGCTACTAGAATGGCAAGGCATGAATGTGTGTATGTAACAGTGGTTAGGTTCCTTCTATTTGGAGAGGAGAATTCTAAAGATAGAAAACGTGACAGTGATCTTATAGATGAATATAGATACTATAATGCTGGAAATCGTAGGTTTGAGATTATGGATGAAGTGGTGAAAGATGGGATAGAGATGTCTACATGTATAAGAAGGATGATAGATTATTTTGATATAGTGATGGTGGGAAGGCAGCATCCAGAGAGTGTTATTTTTCAGGGACATGATCAATGGAGTGAGTGTCAAGAGCTAGGGGTCATTGGGGACATGTTATCATCACCAGATTTTATGACCAAGGCATCGGTGTTGGTGGTGCAACAACAGAGAATAAGAGGCAGGTTTCTTAAACACAATATGAATGCGAATCCGAATCCGAATCCAGTGCCTAATCACAGAGATCAGCTCGTACATGATGTTCCAATTGATGAAACATTAAGTCCTTCATGTACTATTTCAGTCGACAAATATGACAAAATGTAG 2454 0.4189 MAAVSEIGNKTLVCQDPHSFGHVDIWHAGNPFESPTCLLFLQVSLMTIVTQLMDVCLKQLGQSSLVAQILGGVLFGPSMLGNKKILGQTLFPVKGAVVLETVASFGLMFFFFIWCVKMDIATLLKTEKLAITLGISVFSFTLVIPTGLAMLLKQYVPMDHSLAHALPFLALSQTLTVFISIAVLLTDLKILNTDIGRITMSAAMFADVAGFSMTVILFAVLQNKSGSFLTLTFILLSIFALLLVIIFVMRPAILWMVKHSGGSSVNEICVVFIFLLVLLSGFVSELIGQHFIMGPIILGLAIPEGPPLGTALMSKLDTICMAFLYPIYLAVNGLQTDIFKIDMQSLWIVCLILIVSFFVKIGAVMLPGYYYNLPMKECCIIGFLLNGRGIAELAMYNMWTAGELLTEQEFSLMVASIVVINAIIAPLVRYIYDPSEQYQTGRRCTIQHTRRDSELRVMVCIHNNENLPTILNLLEASYASRESTIEVTALVLVELHGRARPILVANQPHDDLRSMSCNASHIDNALRQYAQQNEGYVSVQSFTSISTFETVYDDICRISLDSGANILILPFHKRWEIDGTVEISHRSIQTMNIKVLEMAPCSVGILVDRGILSASPSLLTARAAYYVAVFFIGGADDAETLAYATRMARHECVYVTVVRFLLFGEENSKDRKRDSDLIDEYRYYNAGNRRFEIMDEVVKDGIEMSTCIRRMIDYFDIVMVGRQHPESVIFQGHDQWSECQELGVIGDMLSSPDFMTKASVLVVQQQRIRGRFLKHNMNANPNPNPVPNHRDQLVHDVPIDETLSPSCTISVDKYDKM 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00302 817 PANTHER CATION/H + ANTIPORTER 14 767 - -
Pumo1g00302 817 Gene3D - 37 440 IPR038770 -
Pumo1g00302 817 Pfam Sodium/hydrogen exchanger family 47 428 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00302 Pumo-Chr1 4646364 4649552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00302 9 765 Antiporter Super Family AT2G13620 34.522 6.16e-153 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00302 K26731 - gmx:100779700 1354.35