Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00295 ATGAGTAAAAGTTTCACCCCCACGGTCTTTAATGACACTAGAACGGGTCAAATGGTAGTTTGTCTCAAGAATGATAGAACTGTAGGGTCTTTAGGCGTGTGGATTGGGGATAATCCATTCGACTTTGTGGTTCCTGTCACATTGTGTCAAATCATTATAGTCGGTTTACTCTCAAAAGCGCTTCATTATGTCCTCAGGCCAATAAATACACCCAAATTCATCTGCTGCGTCATCGCTGGCGTTCTGTTGGGGCCAACATTCATAGGGCGCAAGGAAGAAATAATGGGGAGTCTCTTTCCGCTAAAACAATATGTGTTTTTAAATACCATGTCCAAAATAGGCACTACTTATTGTGTGTTCCTCACATGTCTGAAAATGGACGTGATGACAACATTAAGATCAGCGAAACGTTGTTGGCGATTCGGTGTGTTTCCCTTTTTGGCTTCTTTCGTGGTCACAGTAGGCCTGTTTTCTTTGTATTCTCCCCACGGTGCCACTGCTAAAAAGAATCAAATGTCAATGTACAACTTCCCCAACGTCTTCACCTTGAGCAGTTTCGCCGTTGTGTCCGAAACCTTGATGGAACTAAACCTGGTAGCCACGGAACTAGGCCAAATTGCTCAATCTTCAGCCATGATCAGCGAAATATTGCAATGGACTACGATGCAACTCCAGTTCAACTCAAAAATTAGCTTGCAATTTGTACTTGTATTTTTGACAGCTGCATGTGGATTCGCTGTGTTATGTCTTCTTATTATACGACCACTGGCGAATATTGTTGTTGAGAGAACACCACCGGGGAGGCCAATTAAAGAATCATACGTTGTCTTGATACTTCTGGGGCCTTTAGTTATGGCAGCTATTAGTGACAGCTTTGGCATATATTTCGTCATGGGACCTTTCTTCTATGGTTTGGTTCTGCCCAATGGACCCCCCCTCGGTACAACAATTATTGAGAGAAGTGAATTGCTCGTCAATGAGTTCTTTATGCCTTTCTTCTTGTTGTTTATAGGCACAAGGACAAATTTGAATACAATTCATGAGCATTGGAAGGTCGTTCTGGTAGTTCTCGGCTATCTTGTTAGTGGGGTGCTTGGTCAAGTCGAACTCATCTTTTACAGTAGAATGAATAAACTCAGGGTTATTGATACAGAAGTATTCAGCGTAGCGGTGATGTATGTGGTGTTCATGACATCACTTTGCATACCCATGATCAAATCCTTGTACAGGCACCGTCGGGTGTGTAAAACGCCAACCATACAAGAAGGGCGTGTGAAAACAATCCAAAGCATAATCGAAAACACAGAGTTGAACATCGTCTCTTGTGTGCACACGGATCAACACGTGCACAGCATGATTGCCCTAATAGAGGCATGCAACCCCACCATACTAAGCCCCTTATACGTCTACGTGGTCCATCTCATAGAGCTCGTTGGCAAAAGCACACCCATTCTTCTTCCCATGAACAAGAACAACAGAAAATCCTTGTCCGTGAACTACCCCAACACCAACCACATTTTACGTGCCTTTGAGAACTACTCCAACAACTCAAGTGGTCCTGTAACGGTTCTTTCGTACGTCAACGTGGCCCCATACAAAAGCATGCACGAGGCAGTTTGTAACCTCGCTGAAGATGCCTCGGTGCATCTACTCATTATACCCTTTCACCAAAATGATCAAACCCTAGGAAGCCACGTGGCATGCACCTTTCGTGACCTAAACACAAATTTCCTTGCTAATGCAAAGGGTACGTTGGGGATACTAGTGGATAGATACTCGGTGCTAAGTGGGAGTAGCTCCAAGTTGTCTTTTCATGTGGGTATCATCTTCATTGGTGGAAAAGACGATAGGGAAGCATTGGCGTTGGGAATTCGAATGTTGGAACGCCCCAATACGCGTGTCACCTTGTTCCGGTTTGTTTTGCCTACCAAAGAAGTATCCGGGTTTGTTATATATGGACTTATAGAAAATGAAGAGGAAAAATTAGAGAGCACGTTGGACGAGAGTTTAATAGATGAATTTATAGCCAAGAATGATATTAGTGGTGATAGTGTTAACATTGTTTACCGTGAGGTTGTGGTGGAAGATTGCATACAAGTGTTAGAAGCGATTAGGGGAATGGAGAACGACTATGACCTTGTGATGGTGGGCAAACGACATAGCATGGGGGATTTTAGGGAAGAAGAAATGTCAAATTTCATGGACAATTCGGATCAGTTGGGAATTTTTGGGGATATGTTGGCATCCAATGAGTTTTGTAATGGGAAAGCTCCCGTATTGGTGATGCAATGCGGTGATGAGAAGAGGGTAAAACACTTAGAAAAGGTTGGCCATGGCAACCTCTTCCTTTAA 2352 0.4341 MSKSFTPTVFNDTRTGQMVVCLKNDRTVGSLGVWIGDNPFDFVVPVTLCQIIIVGLLSKALHYVLRPINTPKFICCVIAGVLLGPTFIGRKEEIMGSLFPLKQYVFLNTMSKIGTTYCVFLTCLKMDVMTTLRSAKRCWRFGVFPFLASFVVTVGLFSLYSPHGATAKKNQMSMYNFPNVFTLSSFAVVSETLMELNLVATELGQIAQSSAMISEILQWTTMQLQFNSKISLQFVLVFLTAACGFAVLCLLIIRPLANIVVERTPPGRPIKESYVVLILLGPLVMAAISDSFGIYFVMGPFFYGLVLPNGPPLGTTIIERSELLVNEFFMPFFLLFIGTRTNLNTIHEHWKVVLVVLGYLVSGVLGQVELIFYSRMNKLRVIDTEVFSVAVMYVVFMTSLCIPMIKSLYRHRRVCKTPTIQEGRVKTIQSIIENTELNIVSCVHTDQHVHSMIALIEACNPTILSPLYVYVVHLIELVGKSTPILLPMNKNNRKSLSVNYPNTNHILRAFENYSNNSSGPVTVLSYVNVAPYKSMHEAVCNLAEDASVHLLIIPFHQNDQTLGSHVACTFRDLNTNFLANAKGTLGILVDRYSVLSGSSSKLSFHVGIIFIGGKDDREALALGIRMLERPNTRVTLFRFVLPTKEVSGFVIYGLIENEEEKLESTLDESLIDEFIAKNDISGDSVNIVYREVVVEDCIQVLEAIRGMENDYDLVMVGKRHSMGDFREEEMSNFMDNSDQLGIFGDMLASNEFCNGKAPVLVMQCGDEKRVKHLEKVGHGNLFL 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00295 783 PANTHER CATION/H + ANTIPORTER 28 763 - -
Pumo1g00295 783 Pfam Sodium/hydrogen exchanger family 52 362 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Pumo1g00295 783 Gene3D - 46 416 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00295 Pumo-Chr1 4550654 4553613 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00295 32 763 Antiporter Super Family AT2G13620 31.210 5.63e-120 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00295 - K26731 vun:114176193 1097.03