Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00294 ATGGCGACTTCACGAGGCAATGGAACTGTCTCAAGTTATTGGGATTCCCAAGGGCAGTGGCAAGTTTGTGTCGAAGACGATAGAAATGTGGGCTCTTATGGCATTTTCATTGGGGATCGTCCATTCGAATTTGTGCTTCCTGTAACGTTGTGCCAACTCTTCACCGTCATCTTAGTCTCTCGAACGCTTTACTTTCTTCTCAGGCCTATAAGAACACCCAAATTCATCTGCAACGTCCTGGGTGGCATTATTTTGGGCCCCACAATTATGGGGCGCAACAAGACGTATAGGCAGGCTCTATTTCCACCAAGACAGACCCAGTATTTAGTGTTGGCATCCTTAGTGGGCGCTGTATATTTCCTATTCTTGGTTGCATTGAAAATGGACGTACTAATGACCATAAGAGCAGCCAAAAGTACTTGGCGACTTGGAGTGATGCCCTTCCTGGCTTCATTTGTGGTTATGTTATCACTCTTATGTGTCTATTATAACCCGCAAAAAATCTCTCCTGCATATTTAACACTCGCCCGTGTCTCAATAAGCTGTACAATGTCATTTACTAACTTCCCCGTCGTCTCTGATGCAATGATTGAACTAAACCTCATAGCCACAGAACTTGGCCAGATCGCTCTCTCTTCCTCCATGATCAACGACCACATACTAGGCCTTTTTCTAGTCATCCATAGCTTGGCATCCGAAGATGACATGAAAAAATCAATCACATTGTTGTGCAACTGGTGGTTGTTCGTGTTTTTCAACATTTTGGTTTTGCGACCAACCATGAAATTGATTGCTCGGAGAACCCCAGTTGGGAAACCCGTGAAGGAAGTTTATGTTGTGTTGATACTTATCGGGGTGCTAGTCATGGCAGGTGTGGGAGACTTGATTGGCATAACGTTCCTCATGGGACCCTTGGTTTTTGGTTTGGTCATACCAAGTGGACCCCCCTTGGGCACAACGCTTATAGAGAAGAGTGAGCTTCTTATCACCGAGTTTCTGCTACCCTTCTTCTTCGTCTACATAGGCATGAACACAGATTTGTCTGCACTCCAGAACTGGCGCTTGTTTTTGACTCTGCAGGGTGTTTTCTTCGCGGGAGACTTGGCCAAGTTGCTCGCCTGTGTCCTGGTTTCTCTAACATACAACATTAGACCCAAACATGGCACACTGCTTGGCCTCATCTTGAACATCAAGGGCATAACTCAACTCATAGGTTTCGCGAGACTCAGGAAACTGAAGATGTTGGATGAAGATACATTCAGTCAATTAGTGTGTTGTGTGGTGGTTATCAGCGCGATTGTGACACCCTTGATTAACTTATTGTACAAGCATCGGCCTCGAGTACACGCAGCAAGCTTATTTGAAGGGCAAGTGAGAACGATCCAAAGCACTCCAAGAAACACAGAGTTTCGCATTATTTGTTGTGTGCACAACGAAGGAAACGTGCGTGGCGTCACTGCCTTACTAGAAGAGTGCAACCCGGTGCCAGAGAGCCCCATATGTGTCTACGCAATACACCTCATCGAGCTCGTGGGGAAAAGCACACCCATTCTCCTTCCCATTAACTATAATAATAATAATAGACAAAACAAAACATCCTTGTCGGTCAATTACCCCCACACCAACCCCATCATGCGTGCCTTCCAAAACTACTCCAACAACTCCTGTGGGCCCGTCACGGTTCTCCCCTACGTCAACGTCGCACCTTACAAGAGCATGCCCGATGCCATTTGCAACCTCGCCCAGGACAAGATGGTGCCTTTTATCATCATCCCTTTTCACGAAAATGACAACGTTGACCTTGTCGGCCACGTGGCAGCCTCCATCCGCAAGATGAATACTAGGTTCCAAGCGCACGCGCCGTGCACGTTGGGGATACTCGTGGACAGGTACTCGCGGCTGGGCGCGTGCAACAACTCCAACGTGGGGATATTCTTCATTGGCGGGCCCCACGACAGGGAAGCGTTGGCGTTGGGAATTCGAATGTCGGATCGCGCAAATACGAGGGTGACCTTGTTCCGGTTTATTATCGTGAACAAGAAAATGTGTAGTGGCAAAATAATTTTAACTAGAGAAGAGCGTGAAGAGGAAGAGGCGGATAACATGTTGGACGAGGGGTTAATTGATGAGTTCAAGAGCATGAAATATGGGAATGGTAACGTTTGTTGGTACGAGATTATGGTGGAGGATGGAGTGGAGGTGTTGGATGTAGTTCATAGTTTGGAAGGAAACTATGACCTTGTGATGGTGGGGAGGCGCCACAATGATGCATCTTTGGATGGTGAGGAAATGGCAACATTCATAGAGAACGCTGAGGCATTGGGAATATTGGGGGATATGTTGTCTTCAACGGAGTTTTGTTTGGGATTGATTCCGGTTTTAGTCACACAGTGTGGTGGGATCAGGGTAAATAGTAATAAGCTCGATAGACTAGGTTCAGTTAATGTCTCACAAAAAAGTTTATCTGTTCATAATTAA 2478 0.4645 MATSRGNGTVSSYWDSQGQWQVCVEDDRNVGSYGIFIGDRPFEFVLPVTLCQLFTVILVSRTLYFLLRPIRTPKFICNVLGGIILGPTIMGRNKTYRQALFPPRQTQYLVLASLVGAVYFLFLVALKMDVLMTIRAAKSTWRLGVMPFLASFVVMLSLLCVYYNPQKISPAYLTLARVSISCTMSFTNFPVVSDAMIELNLIATELGQIALSSSMINDHILGLFLVIHSLASEDDMKKSITLLCNWWLFVFFNILVLRPTMKLIARRTPVGKPVKEVYVVLILIGVLVMAGVGDLIGITFLMGPLVFGLVIPSGPPLGTTLIEKSELLITEFLLPFFFVYIGMNTDLSALQNWRLFLTLQGVFFAGDLAKLLACVLVSLTYNIRPKHGTLLGLILNIKGITQLIGFARLRKLKMLDEDTFSQLVCCVVVISAIVTPLINLLYKHRPRVHAASLFEGQVRTIQSTPRNTEFRIICCVHNEGNVRGVTALLEECNPVPESPICVYAIHLIELVGKSTPILLPINYNNNNRQNKTSLSVNYPHTNPIMRAFQNYSNNSCGPVTVLPYVNVAPYKSMPDAICNLAQDKMVPFIIIPFHENDNVDLVGHVAASIRKMNTRFQAHAPCTLGILVDRYSRLGACNNSNVGIFFIGGPHDREALALGIRMSDRANTRVTLFRFIIVNKKMCSGKIILTREEREEEEADNMLDEGLIDEFKSMKYGNGNVCWYEIMVEDGVEVLDVVHSLEGNYDLVMVGRRHNDASLDGEEMATFIENAEALGILGDMLSSTEFCLGLIPVLVTQCGGIRVNSNKLDRLGSVNVSQKSLSVHN 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00294 825 Gene3D - 48 451 IPR038770 -
Pumo1g00294 825 PANTHER CATION/H + ANTIPORTER 29 797 - -
Pumo1g00294 825 Pfam Sodium/hydrogen exchanger family 54 437 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00294 Pumo-Chr1 4544831 4547968 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00294 34 809 Antiporter Super Family AT2G13620 32.661 1.18e-135 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00294 - - gmx:106794183 1347.41