Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00281 ATGAGCAAAAACTGGAAATCTAGCTGCTTCAGGGATCCTGGGGGACTTCTGTCCCTTCTTGTGTTGTGTTTGTTGTTTCAGAACTTTAGTTTGTGCTGCTCTTTGAATGAAGAAGGTAAAGCTCTTTTGAAGTTCAAGCAGGGAATAGTACGCGACCCTTTTGGTGCTTTGTCCAATTGGGTTAACGATGAAGTAGCAGTTAACCCTTGTAATTGGTTTGGAGTTGAGTGCTCTGATGGAAGAGTAGTGGTCTTGAATTTGAAAGACCTTTGTCTCAAAGGAAATCTGGTACCTGAGCTCGCAAACCTTGTTCACATAAAGTCCATAATTTTGCGGAACAATTCTTTTTATGGAATCATCCCCCAAGGAATTGCACACTTGAATGAATTGGAGGTTTTGGATTTGGGCTACAACAACTTCAGTGGACTGCTGCCTACAGATCTTGGGAATAATATTTCGCTGACAATCCTTTTGCTGGACAACAATGATCATCTTTGTGGTTTCTCTCCTGAAATTAATGAGTTGAAGATGCTTTCTGAATACCAAGTAGATGAAAACCAACTAATAAGTGCAGAAAAAGTGCCAGCTTGTAGAAGATCCATCAATCAGCATGTTGGCCAAAATAAAAATGGTGTTCGGAGGCTACTGCAAACTCGTACTCGTGAAGGTGGAAGTCCTTTTAATCGTGCAGTTACTTTTCCTGATAGTCCTGCCCCATCTCCTTCAGCTCCCTCACCTGCCCCAGCAATGCCACCACAGGTTCAGGGGCCAGCTTCCGCTGACCGAAATGATTCTGCTTCTCCTTCTCCCCTGCCCGAACCACGCTCTTCACCAGCATCTAAAAGTAGCTCATCAAATAACCATCTAGTTGTTATTTTGGCTGGAGTTATAGGTGGTGCTGTATTTCTTCTCATTTCAATCATTGGCCTATATCTCTGTAAAACAAACAAGGTAGCTACTGTAAAACCTTGGGCCACAGGATTAAGCGGACAGCTTCAGAAGGCATTTGTGACAGGTGTGCCAAAGCTAAAGAGATCAGAACTTGAAGCAGCATGTGAAGATTTTAGTAATGTAATTGGCACTTCATCCATTGGCACAGTGTACAAAGGGACTTTATCTAGTGGTGTTGAAATAGCTGTGGCATCTGTTGCAGTGACATCATCCAAAGATTGGTCAAAGACTTCAGAAGCCCAATTTAGGAACAAGATAGATACATTATCAAAAGTGAACCACAAAAATTTTGTAAATCTTCTTGGACATTGTGAAGAAGATGAGCCTTTCACCAGAATGGTGGTTTTTGAGTATGCCCCAAATGGAACACTCTTTGAGCATTTACACATAAAAGAATCTGAGCACTTGGATTGGGGAACAAGACTTAGAGTTGCCATGGGCATGGCTTACTGCCTGCAACATATGCACCAGTTGGAGCCTCCTTTGGTCCTTAGCAACCTGAATTCTTCAGCTGTCCAACTCACTGATGATTATGCTGCCAAAATCTCTGATTTGAGTTTCTTAAATGAAATAGCTTCAGCTGTGATAAAATCTCCTGCTAGAAAATACACTGACATGACACCAGCAAGCAACATTTACAGCTTTGGTGTTGTATTATTTGAAATGGTAACTGGCAGGCTTCCTTATTCAGTTGACAATGATGGCTCACTTGATGACTGGGCTTCACACTATTTACAAGGGGATCAGCCCCTCAAAGAAATGGTGGATCCAACTCTAGCATCCTTCCAAGAAGAACAGCTGGAACAAGTTGCTGCTTTGATTAAATCTTGTGTCTATCCTGATCAAAAGCAAAGACCAACAATGAAAGAAGTTTGTGTGAGATTAAGAGAGATAACAAAAATAACACCTGATGCAGCTGTTCCAAAGCTTTCTCCACTTTGGTGGGCAGAGCTTGAGATTGCTTCTGTAGATGCAAGCTGA 1932 0.4198 MSKNWKSSCFRDPGGLLSLLVLCLLFQNFSLCCSLNEEGKALLKFKQGIVRDPFGALSNWVNDEVAVNPCNWFGVECSDGRVVVLNLKDLCLKGNLVPELANLVHIKSIILRNNSFYGIIPQGIAHLNELEVLDLGYNNFSGLLPTDLGNNISLTILLLDNNDHLCGFSPEINELKMLSEYQVDENQLISAEKVPACRRSINQHVGQNKNGVRRLLQTRTREGGSPFNRAVTFPDSPAPSPSAPSPAPAMPPQVQGPASADRNDSASPSPLPEPRSSPASKSSSSNNHLVVILAGVIGGAVFLLISIIGLYLCKTNKVATVKPWATGLSGQLQKAFVTGVPKLKRSELEAACEDFSNVIGTSSIGTVYKGTLSSGVEIAVASVAVTSSKDWSKTSEAQFRNKIDTLSKVNHKNFVNLLGHCEEDEPFTRMVVFEYAPNGTLFEHLHIKESEHLDWGTRLRVAMGMAYCLQHMHQLEPPLVLSNLNSSAVQLTDDYAAKISDLSFLNEIASAVIKSPARKYTDMTPASNIYSFGVVLFEMVTGRLPYSVDNDGSLDDWASHYLQGDQPLKEMVDPTLASFQEEQLEQVAALIKSCVYPDQKQRPTMKEVCVRLREITKITPDAAVPKLSPLWWAELEIASVDAS 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00281 643 MobiDBLite consensus disorder prediction 258 284 - -
Pumo1g00281 643 FunFam Inactive receptor-like serine/threonine-protein kinase 327 435 - -
Pumo1g00281 643 Gene3D Ribonuclease Inhibitor 33 219 IPR032675 -
Pumo1g00281 643 Gene3D Transferase(Phosphotransferase) domain 1 436 624 - -
Pumo1g00281 643 MobiDBLite consensus disorder prediction 237 253 - -
Pumo1g00281 643 Pfam Leucine rich repeat 105 163 IPR001611 GO:0005515
Pumo1g00281 643 SUPERFAMILY L domain-like 35 191 - -
Pumo1g00281 643 ProSiteProfiles Protein kinase domain profile. 353 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g00281 643 PANTHER PROTEIN MALE DISCOVERER 2 18 640 - -
Pumo1g00281 643 SUPERFAMILY Protein kinase-like (PK-like) 336 612 IPR011009 -
Pumo1g00281 643 FunFam Nuclear pore complex protein NUP107 35 194 - -
Pumo1g00281 643 MobiDBLite consensus disorder prediction 219 284 - -
Pumo1g00281 643 Pfam Leucine rich repeat N-terminal domain 36 78 IPR013210 -
Pumo1g00281 643 Gene3D Phosphorylase Kinase; domain 1 325 435 - -
Pumo1g00281 643 Pfam Protein tyrosine and serine/threonine kinase 355 611 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00281 Pumo-Chr1 4387519 4391778 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00281 19 608 Receptor kinase-like Gene Family AT1G66830 26.879 5.18e-46 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Pumo1g00281 PK_Tyr_Ser-Thr 4.4e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00281 - - gmx:100784541 1137.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00281 1 4387519 4391778 Pumo9g02295 9 56138277 56143318 PCT