Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00275 ATGGCGACGCAGTGCACTGAGGTTCCACCAAGTGGGGTCCGGGGAAGAAGGTATAGGGACATGAATTGGAGAGACAGGCCCGGCCCGGGCCTGGACCCAAGTTCCACCCCGGCTCGTTTAAAAGCTGCATTAGCCAAAGCGCTTGTTCCTTATTATCCATTCGCCGGAAGGGTTCGGTCCAGGCCCGATGGGGCAGGCCTCGAGGTCGTGTGTCGGGCCCAGGGTGCGGTCTTCATCGAAGCCTCCTCCGAACGTTACACTGTCAACGATTTCCAAAAGGCCCCCAAAACAGTGGCCCAATGGAGAAAGCTCTTATCCCTCTACGTCACCGACGTTCTCAAAGGCTCTCCGATTCTCGTCGTTCAGCTGACGTGGCTCTCCGACGGCGCCGCAGCCGTCGGCGTCGGAATCAACCACTGCCTCTGCGACGGCATCGGCAGCGCCGAGTTTCTGAATTATTTCTCCGAATTAGCTTCCGGGAAGAGTTTTTGTGCCGATCTGAAACCAATACCGAAACCGGTATGGGATCGGCACCTCATGAACCCGAATAATATGACTCGGGCGAATCCAGCGTTGCACGCTGAGTTCGCCCGAGTCCCGGATCTATGTGGATTCATGAACTGTGTGACGAGCGGGCTGAAACCAACGTGCATTGTGTTCGACGAGAGGTGGATCAACGCGCTGAAGAGCGCGTGCGGAATGTCGTACACGTCGTTCGAGGTTCTGGCTGCGCACGTGTGGAGGAGTTGGGCGAGGGCGTTGGGGTTTCCGAAAAACCAGACGCTGAAGCTATTGTTCAGCGTGAACGTGAGGAAGCGCGTGAAGCCGGGGGTGCCGGAGGGGTATTATGGGAACGCGTTTGTGCTGGGGTGCGCGCAAAGCAGCGCGTGGGAGCTGGGGGAGAGAGGGGTGGGGTACGGGTCGGGTCTGGTGAAGCGTGCGAAGGAGAGGGTGGACAGCGAGCACGTACGGAGGGTGGTTGAGTTGGTGTCGGAGTCAAGGGCGAGTCCTGACTCGGTGGGGGTGCTGATACTGTCGCAGTGGTCGAGGCTGGGTCTTGAGAGGGTTGAACTGGGAATGGGGAAGCCTGTGCATGTGGGGCCCATATGCTGTGATAGGTACTGTTTGTTCCTTCCGGTGACCGGTGAAGGGGCCGGGGCCCGGGCCAGTGCCAGTGTGAAGGTCATGGTGGCTGTCCCCACCACCGCCGTTGACAATTTTTCACCGTTTCCTCCGGGAATCCAATTTATGACCCAACCACAACCTCCTAGGTTACGTTGA 1281 0.5863 MATQCTEVPPSGVRGRRYRDMNWRDRPGPGLDPSSTPARLKAALAKALVPYYPFAGRVRSRPDGAGLEVVCRAQGAVFIEASSERYTVNDFQKAPKTVAQWRKLLSLYVTDVLKGSPILVVQLTWLSDGAAAVGVGINHCLCDGIGSAEFLNYFSELASGKSFCADLKPIPKPVWDRHLMNPNNMTRANPALHAEFARVPDLCGFMNCVTSGLKPTCIVFDERWINALKSACGMSYTSFEVLAAHVWRSWARALGFPKNQTLKLLFSVNVRKRVKPGVPEGYYGNAFVLGCAQSSAWELGERGVGYGSGLVKRAKERVDSEHVRRVVELVSESRASPDSVGVLILSQWSRLGLERVELGMGKPVHVGPICCDRYCLFLPVTGEGAGARASASVKVMVAVPTTAVDNFSPFPPGIQFMTQPQPPRLR 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00275 426 Gene3D - 210 409 IPR023213 -
Pumo1g00275 426 Gene3D - 25 197 IPR023213 -
Pumo1g00275 426 Pfam Transferase family 36 377 - -
Pumo1g00275 426 MobiDBLite consensus disorder prediction 1 36 - -
Pumo1g00275 426 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 36 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00275 Pumo-Chr1 4341268 4343663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00275 37 368 Monolignol Biosynthesis Gene Families AT5G48930 29.261 1.21e-41 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00275 - - gmx:100803812 665.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00275 1 4341268 4343663 Pumo9g02300 9 56178629 56180450 PCT