Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00254 ATGCAGAGGCACAAGTGGTGGAAGCAAAGATATGCCAGAAGTACAGCAAAACATGGTCAGGGTGGTGTGGCAACTCTAACCACTGTGACAGCCAATGCAAGAAATGGGAAGGTGCAAAGTTTGGATCATGTCACTGGGACTCAAGCGGAAAGGCTTGTTTCTGCTACTTCAATTGTCCAGGCTTATGTGCAAAGCGCAGCAAGACATGGTCTGGGTGGTGTAGCAGCTCCAACAACTGTGACAAGCAATGCAGGACTAAGGAAGGTGCAACTCATGGAGCCTGTCACGTTTGAATTTGTCAACGCGCTTTACATTCTGAGAATGAATTCTTTCATGTATGGTCGTGAGATAAAGTGTAGAAGCAGTAAGCTGGAGGATAGGATGGCTAAGTACTATGATATTGATGATATTATCATGGAGGAAGAGACTGTGTCAGTTATATTTCAGAAGGCTGCATCTGGAGTGGGAATAGATCCCAGTTCTTCAAACTTTATTGAAACAGGTTCAAAAGTTGAACTGCCTTTTTGGCTTGCTCATGAGTTACAGTTGAGACAAGCAGTATCAGTCAATGTTCCTTCTTGTTTCGATCAAAAAACAAGGCAGGAGCTCCATGCTGATTCTGCAGGTGTGGATCTGAGGTCCAGATGTCCATTTTTCTATGAATTTGGTTGCAAGATAGCACCCATAGTTGGCGACCGAACCATTGGGTTTCTGTTGTTGTCTGCATTTAAGAGTAGGTACAAGGAAATTCTCACCAAGGCGCATTCTGTAGCATTTGCAGCTGGTTCCAAATTTTGGACTATTCTGACAAAAGAAGAGATCAACTTGTATGAGACAGCTCAATCCGCAATGGCATCCTTCAAGAAGTGGCGAATGGGGGGGCCCAGATTTCAGATAGCTTCTATTCTGGAAAAAAAGAGAAAATCTATGGAATAG 936 0.437 MQRHKWWKQRYARSTAKHGQGGVATLTTVTANARNGKVQSLDHVTGTQAERLVSATSIVQAYVQSAARHGLGGVAAPTTVTSNAGLRKVQLMEPVTFEFVNALYILRMNSFMYGREIKCRSSKLEDRMAKYYDIDDIIMEEETVSVIFQKAASGVGIDPSSSNFIETGSKVELPFWLAHELQLRQAVSVNVPSCFDQKTRQELHADSAGVDLRSRCPFFYEFGCKIAPIVGDRTIGFLLLSAFKSRYKEILTKAHSVAFAAGSKFWTILTKEEINLYETAQSAMASFKKWRMGGPRFQIASILEKKRKSME 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00254 311 SUPERFAMILY PriA/YqbF domain 123 192 - -
Pumo1g00254 311 SUPERFAMILY GINS helical bundle-like 191 292 IPR036224 -
Pumo1g00254 311 Pfam GINS complex protein 171 274 IPR021151 -
Pumo1g00254 311 Gene3D - 112 293 IPR038437 -
Pumo1g00254 311 CDD GINS_A_psf3 187 293 - -
Pumo1g00254 311 CDD GINS_B_Psf3 131 192 - -
Pumo1g00254 311 PANTHER UNCHARACTERIZED 128 310 IPR010492 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00254 128 309 Core DNA Replication Machinery Family AT3G55490 67.213 7.99e-90 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00254 K10734 - gmx:100799874 349.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00254 1 3871906 3876886 Pumo1g00254 1 3871906 3876886 ECH