Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00252 ATGCTTGGCCAGCAAGTGATGGAAGATCAATACGTAAAACGACGTGTAACTACGGGATGTTACAACGTAGATGTGTCAAATCCCAATGAAATATGGAAAAGTGAAACCGTCCTGTTTTTCTACCTTCCTACCTTGGCAGCCCAAGTTGCTTTTATGTTGTTATCCACTCGTATTTTGTACTATATCCTCAAACCCTTAAACCAACCTCGTCTTGTTTCTGAGATTTTGATGGGTATTCTGATAAGTCCAGAACTATTTGGATCATCCGCTTTATCTGAGGTTCTCACCCCTTTGAAGTCAATCCTAACTACTGAAACCATATCATATGTGGGACTAATTTACAGTGTGTTCCTGGCTGGCTTGGACATGAACTTTGACACAATCCTAAGAGCAAGAAAGAAGGCCACAAGCATTGCCATTGCTGGTGTTTTGATTCCAATGGTATTGGGGTGTGGCATATATGCTTTGGCTCTAAAATGGTGCAAGGGACCTGCTGATTATTGGGCAGAATTCAACACAACTAAGGCTTATATGTTTTGCAGCTTAATTATAAGTGTCACAGGTTTTCCTATGGTTAGTCACATCCTTGCAGATCTCAAGCTCCTCTATACAGGACTGGGAAAAGTGGCCTTAACAACAGCCATGATCACTGACTTCTATAATTGGGTCATGTTTGCATTGTTGGTTCCATTTGCCATCAACGGTGCAAGCGCCATCTATTCGGTGCTGAGCACCATAGGTTTTGTTCTTTTCTGCTTCTTTGTTATACGCCCCTATTTGGTGCAGATAATAGTGCGCAAAACCAACCAAAATGAGTGGGACAATTACGGGTTGTTCTTTGTGATCATGGGAGCATATGCTTGTGCACTTGTCACAGATCTCCTAGGGACACACCCTGTTGTTGGGGCTCTGGTGTATGGAATAATGATACCTCGTGGTAAATTTACTCACTTGCTCATAGAGAAGTCAGAGGATTTTGGGGCTGTTTATCTGGCTCCATTGTTCTTTGGTAGCTGTGGCATAAGACTCAGAGCAATATATGTTTTAAAAACTCAAGGTTTTGGCCTGGTGCTTTTCATTTTTCTCCTCGCATGCATCCCAAAGATTTTGAGCACTGTGATAGCGACTCAGTTTTATGGTATGTCTGTTCTTGATGGTGTGTCTATTGGACTGCTTATGAACACCAAGGGAATCTTACCAATATTAATGCTCAACAGTGCCTGGGACAAGCAGATTTTGAGTGTGGAGTCCTTCTCAGTTTGGACAATAACTATTCTCTTAATGACTATGATGGTGCCTTTAATCATCAATGCCATATACAAGCCAAGAAAGTTATACAAGCAAAATAAACTAAAGACCATACAGAATTTAAAGGGCGAAATAGAGCTGAGAATATTAGCTTGTGTCCACAACCCTCGGCAAGCGACGGGAATGATCAACATCCTTGATGCATGGCACACCACAAAAGTCTCCCCTCTACGTGTGTTTGCACTTCAGCTTGTTGAACTAAGTGGAAACTCCACTTCCCTTCTGGCTTCCCATATCAATCAGCACAACCAACAGCAAAGTGGTGGTGCACAAGCCCTCACCAAAGCACAAGAAGACTTGGAAAGCATCACCAACATTTTCCAAACATGCACAGGTGCAAATGAGAACAGTAGTGTGGAGACCTTTGCTGCTGCATCCACTTACTCAACCATTCATGAGGACATATACAATGTGACACAGGAGAAGCAAGCAAACTTGATTCTCCTTCCTTTCCACAAACAGTCAAACATAGAGGGCATTCTAGAGACAACCAACACTGCATTCCAAGACGTAAACCGAAATGTGATGAGAGATGCACCATGTTCTGTGGCAATCTTTGTTGACCGTGGACTAGGGTCATTGTTCAAAGTGAACTTGCGTGTGCTCATGTTTTTCATTGGTGGACCTGATGACCGTGAAGCCTTGGCTGTTGCATGGAGGATGTCAAAGCATCAAGGGGTGCAACTATCTGTGGTGAGGATCCTTATGTTTGGTGAGGCTGCAGAAGTTGATGTTTTGTCCCATGTTGAGTCTCGTGGACTATTATCTGTGGTACTAGACAATGAGAAGCAAAAGGAGTTGGATGATGAGTATGTGAGTGCATTTAGACTCAAGGCAGTGAGCAATGAGGATTCTATAAAGTATTCAGAGAAAGAAGTTCGTTGTCGTGATGATATTCCTGAAGTGCTTAAAGAGGTGGATGAAATTGGGTATGATTTGTATATTCTAGGACAAGGAGCAGGTAGGAACTCTTTGATCTTGTCAGAGTTGATGCAATGGAGTGATTGCCCGGAACTTGGTGTCATAGGGGACATGGTGGCATCAAATAGTTTTGGTTCAAGCTCTTCACTGCTTGTTGTACAGCAATATGGGTTTGGGGGAATGGTGTTTGATAATAATAGTAATGCCACACAGCAGCAACCTAGGGAAGTAGTGCCTGCAAACAATGAAGATGACTCTGGGGCACTTGCTGTCAAGATAGAATAG 2514 0.428 MLGQQVMEDQYVKRRVTTGCYNVDVSNPNEIWKSETVLFFYLPTLAAQVAFMLLSTRILYYILKPLNQPRLVSEILMGILISPELFGSSALSEVLTPLKSILTTETISYVGLIYSVFLAGLDMNFDTILRARKKATSIAIAGVLIPMVLGCGIYALALKWCKGPADYWAEFNTTKAYMFCSLIISVTGFPMVSHILADLKLLYTGLGKVALTTAMITDFYNWVMFALLVPFAINGASAIYSVLSTIGFVLFCFFVIRPYLVQIIVRKTNQNEWDNYGLFFVIMGAYACALVTDLLGTHPVVGALVYGIMIPRGKFTHLLIEKSEDFGAVYLAPLFFGSCGIRLRAIYVLKTQGFGLVLFIFLLACIPKILSTVIATQFYGMSVLDGVSIGLLMNTKGILPILMLNSAWDKQILSVESFSVWTITILLMTMMVPLIINAIYKPRKLYKQNKLKTIQNLKGEIELRILACVHNPRQATGMINILDAWHTTKVSPLRVFALQLVELSGNSTSLLASHINQHNQQQSGGAQALTKAQEDLESITNIFQTCTGANENSSVETFAAASTYSTIHEDIYNVTQEKQANLILLPFHKQSNIEGILETTNTAFQDVNRNVMRDAPCSVAIFVDRGLGSLFKVNLRVLMFFIGGPDDREALAVAWRMSKHQGVQLSVVRILMFGEAAEVDVLSHVESRGLLSVVLDNEKQKELDDEYVSAFRLKAVSNEDSIKYSEKEVRCRDDIPEVLKEVDEIGYDLYILGQGAGRNSLILSELMQWSDCPELGVIGDMVASNSFGSSSSLLVVQQYGFGGMVFDNNSNATQQQPREVVPANNEDDSGALAVKIE 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00252 837 Gene3D - 485 773 - -
Pumo1g00252 837 PANTHER CATION/H + ANTIPORTER 29 799 - -
Pumo1g00252 837 Pfam Sodium/hydrogen exchanger family 52 438 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Pumo1g00252 837 Gene3D - 44 449 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00252 Pumo-Chr1 3852471 3855900 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00252 20 799 Antiporter Super Family AT2G13620 36.662 1.79e-175 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00252 - K26731 gmx:100802381 1435.62