Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00238 ATGGAGGGAAAAGAGCAAGATATTTCGTTGGGAGCCAACAAATTCTCAGAGAGGCAACCAATTGGAACTGCGGCTCAAAGCCAAGACAATGGAAAGGACTACACAGAGCCACCCCCGGCTCCACTATTCGAGCCCTCCGAACTCACTTCTTGGTCCTTCTATCGAGCCGGAATAGCTGCATAA 183 0.5027 MEGKEQDISLGANKFSERQPIGTAAQSQDNGKDYTEPPPAPLFEPSELTSWSFYRAGIAA 60
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00238 60 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 12 59 IPR034294 -
Pumo1g00238 60 MobiDBLite consensus disorder prediction 1 45 - -
Pumo1g00238 60 MobiDBLite consensus disorder prediction 19 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00238 Pumo-Chr1 3636619 3636801 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00238 1 59 Major Intrinsic Protein MIP AT4G00430 79.661 2.20e-29 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00238 K09872 - gmx:100791447 121.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00238 1 3636619 3636801 Pumo1g00238 1 3636619 3636801 ECH
Pumo1g00238 1 3636619 3636801 Pumo9g02344 9 56780225 56782578 PCT