Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00232 ATGCCTCCTTCTTCTTCTTCTTCTTCTTCATCTTCTCCTCTTCCTTGTGCACTCACTGTCCTCTCAAAATGCACCGTTGTGCCTCACCAGAACTCCACCATGGGAGACCTCAAGCTTTCTATCTCAGACCTTAACATGCTTTTGTCTCACTACATCCAAAAGGGCTGTCTCTTCACCACCCCCTCTCTCCCCTCTCACACTCTCATCCCTCACCTCAAAAACGCCCTCTCTCAAACACTCTCTCTCTTCCCTCCTCTTGCCGGCCGTCTCAAAACCGACGACGACGGCTACGTCTACATCACATGCAACGACGCCGGCGTCGACTTCATCCACGTCACCGCCGCCGATGTCTCCGTCTTCGACCTTCTGTCCCCGTCCGATGTCCCTCCGGAATTCAAGCAACTCTTCCCCTTCCACCACAAAATCAGTCACACTGCTCATTCCTCCCCTATCATGGCCCTCCAGGTCACCGAGCTTGCCGACGCCGTCTTCCTCGGCTGCGCCGTCTGCCACGCCGTCACCGACGGCGCCTCCTTCTGGAACTTCTTCAACACCTTCGCCGGAATCTCAAGGGGTGCCACGTCTCACTCCAGCCTCCCGGATTTCCGCCGGGAATCCATCCTCAACTCCAAGGTCGTGCTCCGCCTGCCGGAAGACATCAAGGTCACCTTTAATGTGGAGGAGCCTTTTCGCGAGAGAATCTTCAGCTTCAGCCGCGAGTCAATTCAGAAGCTGAAGGCAACCGTGAACACTCGCTTGACAGCGTTTCCGCCGGAGAACGGTGACGCGGTTGAGTTGATGGGGAAGATGAGCAGCGACACGCTTCTGAAAACGACAGAGATTTCGTCGTTTCAGTCGCTGTGCGCACTGGTGTGGCGCTGCGTGACAAGGGCGCGGAATCTCGAGGGGTCTAAAGCGACGACGTTCAGAATGGCAGTCAATGTTCGCCACCGCATGGAGCCCAAGTTGGGGGACTGTTACTTCGGGAACGCAATTCAGAGCATTGCCACTGTGTGCAGCAGCTGGTGA 1029 0.5617 MPPSSSSSSSSSPLPCALTVLSKCTVVPHQNSTMGDLKLSISDLNMLLSHYIQKGCLFTTPSLPSHTLIPHLKNALSQTLSLFPPLAGRLKTDDDGYVYITCNDAGVDFIHVTAADVSVFDLLSPSDVPPEFKQLFPFHHKISHTAHSSPIMALQVTELADAVFLGCAVCHAVTDGASFWNFFNTFAGISRGATSHSSLPDFRRESILNSKVVLRLPEDIKVTFNVEEPFRERIFSFSRESIQKLKATVNTRLTAFPPENGDAVELMGKMSSDTLLKTTEISSFQSLCALVWRCVTRARNLEGSKATTFRMAVNVRHRMEPKLGDCYFGNAIQSIATVCSSW 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00232 342 Gene3D - 220 341 IPR023213 -
Pumo1g00232 342 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 20 338 - -
Pumo1g00232 342 Pfam Transferase family 18 337 - -
Pumo1g00232 342 Gene3D - 18 219 IPR023213 -
Pumo1g00232 342 SUPERFAMILY CoA-dependent acyltransferases 37 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00232 Pumo-Chr1 3599516 3600672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00232 42 332 Monolignol Biosynthesis Gene Families AT5G48930 30.323 2.47e-28 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00232 - - gmx:100799704 560.066