Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00230 ATGTCGGACGCTTTGATCAATGGATTGGCCGGAGCTGGAGGAGGGATCATTGCTCAGCTCATCACATACCCACTTCAAACTGTAAACACTCGTCAACAAACCGAGCGTGATCCGAAGAAAGACACGAGGAGTCAAGGGGCCCTCGAACGAATGTGCCAGGTTGTAAAAGAAGAGGGGTGGGAACGGTTGTATGGAGGTTTGATGCCATCGCTAGTGGGTACAGCTGCGTCTCAGGGTGTTTACTATTATTTCTATCAAATATTCAGGAACAAAGCTGAAGCAGCTGCACTACAACAAAAGAAAATGGGCATTGGTAATGGATCAGTTGGGATGCTCTCCTCACTTCTTGTTGCTGCTTTATCTGGGTGTCTTAACGTGCTCTTGACAAATCCCATATGGGTAATTGTTACCCGTATGCAGACACATAGAAAAGAGTCAAACAGAACTCCAGCTGATCAGGGTTTATTAGTTGCCAATGAGCAACCAATTCTTTCTGCAGTTGAGCCTCTTCCTTATGGAACTAGCCATGTGATTGAAGAAATCTATGATGAAGCTGGAATTTGGGGTTTCTGGAAAGGTGTATTACCATCATGTATCATGGTAAGCAATCCTTCCATACAGTTCATGCTGTATGAAGCCATGTTGGCAGAGTTAAGAAAAAGACGTGCCTGGAGTAAGAAGGGTAGCAATGGGTTAACTGCTTTAGAGATATTTCTTCTTGGAGCTTTAGCTAAGCTTGGAGCTACTGTTGTAACTTATCCGATCATAGTTGTAAAGGCAAGGCTCCACGCTAAACAGGATAAAACTGGAGACAGGAGGCACCATTACAAAGGTACATGGGATGCTATTATTAAAATGATCCGCTATGAAGGGTTTAATGGGTTTTACAAAGGTATGGGCACAAAAATTGTACAAAGTGTGCTGGCTGCTGCTGTTTTGTTCATGATGAAGGAAGAACTAGTTAGGGGGGTTCGTTTCTTGCTTGCCAAGGATGCTGCCAACACTGTAAAGCCAAAGCATCTGTGA 1026 0.4396 MSDALINGLAGAGGGIIAQLITYPLQTVNTRQQTERDPKKDTRSQGALERMCQVVKEEGWERLYGGLMPSLVGTAASQGVYYYFYQIFRNKAEAAALQQKKMGIGNGSVGMLSSLLVAALSGCLNVLLTNPIWVIVTRMQTHRKESNRTPADQGLLVANEQPILSAVEPLPYGTSHVIEEIYDEAGIWGFWKGVLPSCIMVSNPSIQFMLYEAMLAELRKRRAWSKKGSNGLTALEIFLLGALAKLGATVVTYPIIVVKARLHAKQDKTGDRRHHYKGTWDAIIKMIRYEGFNGFYKGMGTKIVQSVLAAAVLFMMKEELVRGVRFLLAKDAANTVKPKHL 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00230 341 Gene3D Mitochondrial carrier domain 9 328 IPR023395 -
Pumo1g00230 341 ProSiteProfiles Solute carrier (Solcar) repeat profile. 232 323 IPR018108 -
Pumo1g00230 341 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 91 IPR018108 -
Pumo1g00230 341 SUPERFAMILY Mitochondrial carrier 3 319 IPR023395 -
Pumo1g00230 341 Pfam Mitochondrial carrier protein 109 219 IPR018108 -
Pumo1g00230 341 Pfam Mitochondrial carrier protein 233 322 IPR018108 -
Pumo1g00230 341 Pfam Mitochondrial carrier protein 7 90 IPR018108 -
Pumo1g00230 341 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 217 IPR018108 -
Pumo1g00230 341 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 1 325 IPR044712 GO:0006862|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00230 Pumo-Chr1 3530040 3535268 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00230 24 322 Chloroplast and Mitochondria Gene Families AT2G47490 29.373 8.10e-29 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00230 K13354 - gmx:100775784 620.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00230 1 3530040 3535268 Pumo1g00230 1 3530040 3535268 ECH