Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00201 ATGGCTTGTCCACACGTTTCTGGGGCAGCAGCATATGTTAAGTCTTTTCATCCAACATGGTCTCCTGCTGCTATTCGTTCAGCTCTAATGACAACAGCTAGACAACTTAATCCCGCAACTAACCTTCATGCAGAATTCGCATATGGAGCAGGCCAAATTGATCCTTCCAAGGCTGTGTACCCCGGTTTAGTATATGATGCTGGTGAAATAGACTATGTAACGTTTTTATGTGGACAAGGCTATAGTACAAGGACTTTACAACTCATCACAGGAGATAACAGTAGCTGCCCTGAAACAAAGAATGGTTCAGCAAGGGATCTAAACTATGCTTCATTTGCACTTTTTGTCCCACCCTCCAACTCCGGTAGTGTAAGTGGCAGTTTTAACAGGACTGTTACAAACGTTGGGTCAGCAACGTCCACATATAAAGCTACTGTGACTGCTCCTGAGGGACTAAAAATTGAGGTGAACCCCAGTGTTCTACCATTCACTTCTCTTAACCAAAAGCAAACATTTGTGCTCTCAATTGAGGGAGCAATAAAACAACCCATAGTGTCAGCCTCATTGGTTTGGAATGATGGTAAGTACCAAGTGAGGAGCCCCATTGTTGTATTCAATACAGCATAA 627 0.4322 MACPHVSGAAAYVKSFHPTWSPAAIRSALMTTARQLNPATNLHAEFAYGAGQIDPSKAVYPGLVYDAGEIDYVTFLCGQGYSTRTLQLITGDNSSCPETKNGSARDLNYASFALFVPPSNSGSVSGSFNRTVTNVGSATSTYKATVTAPEGLKIEVNPSVLPFTSLNQKQTFVLSIEGAIKQPIVSASLVWNDGKYQVRSPIVVFNTA 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00201 208 ProSiteProfiles Serine proteases, subtilase domain profile. 1 59 - -
Pumo1g00201 208 Gene3D - 76 206 - -
Pumo1g00201 208 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 204 IPR045051 -
Pumo1g00201 208 SUPERFAMILY Subtilisin-like 1 60 IPR036852 GO:0004252|GO:0006508
Pumo1g00201 208 Gene3D Peptidase S8/S53 domain 1 72 IPR036852 GO:0004252|GO:0006508
Pumo1g00201 208 Pfam Subtilase family 1 51 IPR000209 GO:0006508|GO:0008236
Pumo1g00201 208 Pfam Fibronectin type-III domain 106 204 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00201 Pumo-Chr1 3166881 3167604 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00201 1 205 Subtilisin-like Serine Gene Family AT5G58830 49.528 1.30e-61 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00201 - - gmx:100795826 379.793