Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00191 ATGAAGGCGCTAATTCTTGTTGGAGGGTTTGGAACAAGGTTGAGGCCATTGACACTCAGTGTTCCCAAGCCTCTTGTTGATTTTGCTAACAAGCCCATGATTCTGCATCAGATAGAGGCTCTCAAGGCCATTGGCGTCGATGAAGTGGTACTAGCTATCAATTACCAACCGGAGGTTATGTTGAATTTTTTGAAGGAGTTTGAGGCAAAACTTGGTATCAAAATCACTTGTTCTCAAGAAACTGAACCGCTGGGTACTGCAGGCCCCTTGGCTCTTGCAAGGGATAAGCTAACAGATGACTCTGGATCTGGAGAGCCATTTTTTGTTCTCAACAGTGATGTTATAAGTGAGTACCCACTTAAAGAAATGATTGAATTCCACAAAGTCCATGGAGGAGAGGCTTCCATAATGGTGACAAAGGTTGACGAGCCATCAAAATATGGTGTGGTTGTGATGGAGGAGACTACTGGACAGGTTGAGAGATTTGTAGAGAAACCAAAGTTGTTTGTTGGTAACAAAATCAATGCTGGAATCTACCTATTGAATCCCTCAGTTTTGGATCGAATTGAACTGAGGCCCACTTCCATCGAGAAAGAGGTGTTTCCAAAGATTGCAGCAGAGAAAAAACTATATGCAATGGTCCTGCCAGGATTCTGGATGGACATTGGACAACCAAAGGACTATATTTCTGGCCTGACACTTTACCTGGATTCCCTGAGGAAAAAGTCTCCTTCTAAACTGGCCAGTGGTCCTCACTTTGTGGGAAATGTCATTGTGCATGAAACTGCCAATATTGGTGAAGGATGTCTTATTGGACCTGATGTTGCAATCGGTCCTGGCTGTGTTGTTGAGTCAGGTGTCAGGCTTTCACGCTGCACAGTTATGCGAGGAGTTCGGATTAAAAAGCATACTTGCATATCCAACAGTATCATTGGGTGGCATTCCACTGTTGGGCAATGGGCCCGTGTGGAGAATATGACTATCCTTGGAGAAGATGTCCATGTTTGTGATGAAGTCTACAGCAATGGTGGTGTTGTTTTGCCCCACAAGGAGATCAAGTCAAACATTCTGAAGCCAGAGATAGTCATGTGA 1092 0.4423 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAIGVDEVVLAINYQPEVMLNFLKEFEAKLGIKITCSQETEPLGTAGPLALARDKLTDDSGSGEPFFVLNSDVISEYPLKEMIEFHKVHGGEASIMVTKVDEPSKYGVVVMEETTGQVERFVEKPKLFVGNKINAGIYLLNPSVLDRIELRPTSIEKEVFPKIAAEKKLYAMVLPGFWMDIGQPKDYISGLTLYLDSLRKKSPSKLASGPHFVGNVIVHETANIGEGCLIGPDVAIGPGCVVESGVRLSRCTVMRGVRIKKHTCISNSIIGWHSTVGQWARVENMTILGEDVHVCDEVYSNGGVVLPHKEIKSNILKPEIVM 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00191 363 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 1 362 - -
Pumo1g00191 363 Pfam Nucleotidyl transferase 2 231 IPR005835 GO:0009058
Pumo1g00191 363 Gene3D Hexapeptide repeat proteins 240 360 - -
Pumo1g00191 363 Pfam Bacterial transferase hexapeptide (six repeats) 263 297 IPR001451 -
Pumo1g00191 363 CDD M1P_guanylylT_B_like_N 1 236 IPR045233 GO:0004475|GO:0005525|GO:0009298
Pumo1g00191 363 SUPERFAMILY Nucleotide-diphospho-sugar transferases 1 314 IPR029044 -
Pumo1g00191 363 FunFam mannose-1-phosphate guanyltransferase beta 1 234 - -
Pumo1g00191 363 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 233 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00191 Pumo-Chr1 3021647 3026003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00191 1 187 Eukaryotic Initiation Factors Gene Family AT4G18300 24.378 4.99e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00191 K00966 - gmx:100818016 707.597