Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00168 ATGATGGCCAAAACCCAAACACTTGTGCTTGTCCTTCCTCTCTGTGTTTTGACTCTCTTTCTGGCCACAAACCTTGCAAAATCTCAGCAAGAAGAGTTTTTCTTCAACGGGTTTGATAGTGCAGCTGCCAACAACATAACATTAAACGGAGGAGCTGTGATTGAGCACAAGGGCTTGCTTCGTTTAACAAACGAGACTCAGAGGGTAATTGGACACGCGTTTTATCCAACCCCAATTCAGTTCAAGCACAAAAACTCCTCCACCGACGCAAAACTTATCTCCTTTTCCACCGCTTTTGCGTTTGCAATCATCCCGCAGTACCCAAAACTCGGTGGCCACGGTTTTGCCTTCACCATTTCGCGCTCCACATCGCTTAGGGACGCATATCCCAGCCAGTACTTGGGCCTCCTCAACCCAAACGATGTGGGGAATTTCTCAAACCACCTATTCGCAGTGGAATTCGACACCGTCCAAGACTTCGAGTTCGGGGACATCAATGACAACCATGTCGGCATCAACCTCAACAACATGGCATCCAACAAATCCGTCGAAGCTGCGTTTTTTTCCCCTGATGACTCAACCAATAAGCAAAACCTCAATTTGAAGAGTGGTCAAGTGACTCAAGCGTGGGTTGATTACGATTCCTCAAAGAACCAATTGGAAGTTAGACTCTCCCCAACTTCCTCCAAACCCACTTCCCCAATTTTGTCATACAAAGTAGATCTCTCACCAATTCTCCAAGATTCCATGTACGTGGGGTTCTCTTCCTCAACAGGGTTACTCGCGAGCTCCCACTATATCCTGGGTTGGAGCTTTAAAATAAACGGAGAGGCAAAAACTCTCTCCTTGAAAAACCTCCCTTCGCTCTCTGCCTCCAACAAAACTCAAAAGCGCTTAATCTTAGGACTGTCCCTTTCATTGATTCTAACACTCGCAGCAATCGCTCTAGCATGCTACCTCTTCAGAAAGATGAAGAACACCGAAGTAGTCGAAGCCTGGGAGATGGAAGTTGTTGGACCGCACAGATTCCCATACAAAGAGCTACACAAAGCCACAAAAGGGTTCAAAGACAAGAACCTCCTCGGGTTCGGTGGGTTCGGTCGCGTCTACAAAGGGGTCCTCCCGAAGTCCCACATCGAAATCGCGGTGAAGCGAGTCTCGCACGAATCAAAACAAGGCATGCATGAGTTTGTGTCGGAAATCTCAACCATAGGAAGGCTCCGACACAGGAACCTCGTACAGTTACTAGGTTGGTGTCGGAAACAAAACGACCTTCTACTAGTCTACGATTTCATGCAAAACGGAAGCTTGGACAAGTACCTATTCGACGAACCGAGGAAAATACTAACGTGGGAGCAAAGGTTTAAGATAATAAAAGGGGTGGCTTCGGGGTTGGTTTATTTGCACGAGGAGTGGGAGCAAACGGTGATTCACAGAGACGTGAAAGCAGGGAACGTTTTGTTGGACGGTGAAATGAATGGGAGGTTGGGTGATTTTGGTTTGGCGAAGCTCTATGAGCACGGTGCGAACCCGAGCACAACGAGGGTAGTGGGAACACTGGGGTATCTTGCACCTGAGCTCACTAGAACGGGGAAGCCTACGACGAGTTCTGATGTGTATGCGTTTGGGGCTTTGTTGTTGGAAGTGGTTTGTGGTCGGAGGCCGATTGAGGCGAAGGCGTTGCCGGAGGAGCTGGTGCTGGTGGAGTGGGTGTGGGAGCGGTGGCGCGTGGGGGCGGCGCTGGGGGTGGTGGACCCCAGGTTGGGAGGGGTGTTTGATGAGGTGGAGGCTTTGTTGGTGATGAAGGTGGGCTTGTTGTGTTCCGCGGAGGCGCCGGAGGAGAGGCCCAGCATGAGGCAGGTGGTGAGGTACTTGGTGGAGGATGGGAAGAAAGGTGGTGCTGGCGATGTTCATTCGTATTCCACGCCGTCGTTTTTGGACAGGGCCAATACGTCGTCGTCGGCGGGGGATGACGTCGACGGGTGCATCTGCCTCCTCTCTGTCGCTTTCCGGTGGCCGTTAGTTGGGCTTGGACAGTTGGACGCATGTCCTATTGATGTTCCAAGAGGTAGCAGCTTCTGCGATAATTTTAATATTTGA 2100 0.5048 MMAKTQTLVLVLPLCVLTLFLATNLAKSQQEEFFFNGFDSAAANNITLNGGAVIEHKGLLRLTNETQRVIGHAFYPTPIQFKHKNSSTDAKLISFSTAFAFAIIPQYPKLGGHGFAFTISRSTSLRDAYPSQYLGLLNPNDVGNFSNHLFAVEFDTVQDFEFGDINDNHVGINLNNMASNKSVEAAFFSPDDSTNKQNLNLKSGQVTQAWVDYDSSKNQLEVRLSPTSSKPTSPILSYKVDLSPILQDSMYVGFSSSTGLLASSHYILGWSFKINGEAKTLSLKNLPSLSASNKTQKRLILGLSLSLILTLAAIALACYLFRKMKNTEVVEAWEMEVVGPHRFPYKELHKATKGFKDKNLLGFGGFGRVYKGVLPKSHIEIAVKRVSHESKQGMHEFVSEISTIGRLRHRNLVQLLGWCRKQNDLLLVYDFMQNGSLDKYLFDEPRKILTWEQRFKIIKGVASGLVYLHEEWEQTVIHRDVKAGNVLLDGEMNGRLGDFGLAKLYEHGANPSTTRVVGTLGYLAPELTRTGKPTTSSDVYAFGALLLEVVCGRRPIEAKALPEELVLVEWVWERWRVGAALGVVDPRLGGVFDEVEALLVMKVGLLCSAEAPEERPSMRQVVRYLVEDGKKGGAGDVHSYSTPSFLDRANTSSSAGDDVDGCICLLSVAFRWPLVGLGQLDACPIDVPRGSSFCDNFNI 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00168 699 SUPERFAMILY Concanavalin A-like lectins/glucanases 32 289 IPR013320 -
Pumo1g00168 699 Pfam Legume lectin domain 31 286 IPR001220 GO:0030246
Pumo1g00168 699 Gene3D - 29 275 - -
Pumo1g00168 699 ProSiteProfiles Protein kinase domain profile. 355 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g00168 699 ProSitePatterns Serine/Threonine protein kinases active-site signature. 476 488 IPR008271 GO:0004672|GO:0006468
Pumo1g00168 699 SMART serkin_6 355 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g00168 699 Pfam Protein kinase domain 355 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g00168 699 PANTHER - 23 626 - -
Pumo1g00168 699 FunFam Lectin-domain containing receptor kinase A4.3 340 431 - -
Pumo1g00168 699 SUPERFAMILY Protein kinase-like (PK-like) 339 625 IPR011009 -
Pumo1g00168 699 CDD STKc_IRAK 361 625 - -
Pumo1g00168 699 CDD lectin_legume_LecRK_Arcelin_ConA 32 276 IPR001220 GO:0030246
Pumo1g00168 699 ProSitePatterns Protein kinases ATP-binding region signature. 361 384 IPR017441 GO:0005524
Pumo1g00168 699 Gene3D Phosphorylase Kinase; domain 1 340 431 - -
Pumo1g00168 699 Gene3D Transferase(Phosphotransferase) domain 1 432 633 - -
Pumo1g00168 699 FunFam L-type lectin-domain containing receptor kinase S.4 29 280 - -
Pumo1g00168 699 FunFam L-type lectin-domain containing receptor kinase S.4 432 634 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00168 Pumo-Chr1 2753550 2756768 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00168 31 625 Receptor kinase-like Gene Family AT3G55550 63.455 0.0 758
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pumo1g00168 Pkinase 3.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00168 - - gmx:100804136 1087.02