Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo1g00166 | ATGGCTTCAAATTCCTTGAACAATAATAACAAAGAATATTTTCCCTCTTGGACAAGATTGCAGAACAAACAATTTGAAAGGGCATTGGTCTTGTACGATGAACACACCCAAGATCGGTGGCAAAATATAGCCAAAGAAGTTGGCAATAAATCGGTGGAGGAAGTGAAGAGACACTATGCAATTCTTTTAGAAGATCTTAGTAGAATAGAGTCGGGGCGTGTTCCAATTCCCGATTATAAGTTATCAGAAAACATGGATGATGATTGA | 267 | 0.3783 | MASNSLNNNNKEYFPSWTRLQNKQFERALVLYDEHTQDRWQNIAKEVGNKSVEEVKRHYAILLEDLSRIESGRVPIPDYKLSENMDDD | 88 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo1g00166 | 88 | ProSiteProfiles | SANT domain profile. | 12 | 59 | IPR017884 | - | |
Pumo1g00166 | 88 | FunFam | Transcription factor SRM1 | 9 | 76 | - | - | |
Pumo1g00166 | 88 | Gene3D | - | 14 | 76 | - | - | |
Pumo1g00166 | 88 | SMART | sant | 13 | 65 | IPR001005 | - | |
Pumo1g00166 | 88 | CDD | SANT | 16 | 59 | IPR001005 | - | |
Pumo1g00166 | 88 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR-RELATED | 1 | 83 | IPR044636 | GO:0003700 | |
Pumo1g00166 | 88 | SUPERFAMILY | Homeodomain-like | 16 | 70 | IPR009057 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo1g00166 | Pumo-Chr1 | 2744914 | 2745180 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB-related | Pumo1g00166 | None | None | None |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo1g00166 | - | - | gmx:100785957 | 154.066 |