Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00161 ATGGGCGATGCAATTGATTTGACTGGTGATGGAGGAGTCATTAAGACCATTGTCAGAAAAAGCAAAGCCGATGCTGTCGGTCCAACAGAAAATTTTCCTCTTGTTGATGTTCATTATGAAGGCACACTTGCTGATACTGGGGAAGTTTTTGACACTACGCATGAAGATAACACCATCTTCTCTTTCGAGCTTGGAAAGGGCAGTGTTATCAAGGCTTGGGAAATTGCAGTGAAAACCATGAAGGTTGGAGAAGTTGCAAAAATAACTTGCAAGCCAGAATATGCATATGGCAGTGCAGGATCTCCTCCTGATATTCCTCCAGATGCAACACTTGTTTTTGAAGTTGAGCTAGTTGCTTGTCGGCCAAGGAAGGGCTCCAGTCTGGGAAGTGTTTCAGAGGAGAGAGCTAGGCTTGAAGAGCTGAAGAAGCAGAGAGAGCTAGCTGCTGCTGCGAAAGAGGAGGAGAAGAAGAAGAGAGAAGAAGCAAAAGCAGCGGCTGCCGCACGTGTGCAAGCCAAGTTAGAAGCCAAAAAAGGTCAAGGAAAAGGTAAAGGTAAAGCGAAGTAG 567 0.4568 MGDAIDLTGDGGVIKTIVRKSKADAVGPTENFPLVDVHYEGTLADTGEVFDTTHEDNTIFSFELGKGSVIKAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPDATLVFEVELVACRPRKGSSLGSVSEERARLEELKKQRELAAAAKEEEKKKREEAKAAAAARVQAKLEAKKGQGKGKGKAK 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00161 188 SUPERFAMILY FKBP-like 8 124 - -
Pumo1g00161 188 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 32 121 IPR001179 GO:0003755
Pumo1g00161 188 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 10 181 - -
Pumo1g00161 188 Gene3D - 2 120 IPR046357 GO:0003755
Pumo1g00161 188 MobiDBLite consensus disorder prediction 150 166 - -
Pumo1g00161 188 MobiDBLite consensus disorder prediction 150 188 - -
Pumo1g00161 188 Coils Coil 131 170 - -
Pumo1g00161 188 FunFam Peptidylprolyl isomerase 1 120 - -
Pumo1g00161 188 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 34 118 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00161 Pumo-Chr1 2693268 2696852 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00161 4 146 Calmodulin-binding Proteins AT5G48570 36.486 4.70e-13 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00161 K01802 - gmx:100500018 267.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00161 1 2693268 2696852 Pumo1g00161 1 2693268 2696852 ECH