Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00158 ATGTTAGAATGGAAGATACGATGTCGAATTATTGAAGGAGTTGCACAAGGACTTGTATATTTACATCAATATTCAAGATTGAAAGTGATACATAGAGACTTGAAAGCTAGCAACATTTTATTGGACAATGAGTTGAATCCAAAAATATCAGATTTTGGAATGGCTAGAATATTTGAACTAACAGAATCTGAAGAACAAACTAACAGAATAATTGGTACATATGGCTATATGTCTCCAGAGTACGCTATGATGGGTGTTATCTCAACTAAAACCGATGTTTATAGTTTTGGCATTCTACTGCTAGAGATAGTGAGTGGAAAGAAAAATAGTAATGATTATCCAATGAATCTTGTCGTTTATGCATGGAAATTATGGAATGAAGGTGAAGCACTAAAGCTAATGGACTCAACATTGGTTGGGTCATGGACTCAAGTGTTACGCTATATTAATATAGGTCTCTTATGCACGCAAGAGCAAGCAAGAGAGAGGCCTACTATGATTGAAGTTGTTTCTTTTCTTGCAAATGAAATTGTCGAATTACCTTTGCCTAAACAACCGGGGTTTTGTACCATTGAGTCCATGGAAGAGATAGAACAACATAGAAGTTGTTCACTAAATGTGATAACAACTTCATTGACATCAGGTAGATAA 651 0.3502 MLEWKIRCRIIEGVAQGLVYLHQYSRLKVIHRDLKASNILLDNELNPKISDFGMARIFELTESEEQTNRIIGTYGYMSPEYAMMGVISTKTDVYSFGILLLEIVSGKKNSNDYPMNLVVYAWKLWNEGEALKLMDSTLVGSWTQVLRYINIGLLCTQEQARERPTMIEVVSFLANEIVELPLPKQPGFCTIESMEEIEQHRSCSLNVITTSLTSGR 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00158 216 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1 181 - -
Pumo1g00158 216 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 214 - -
Pumo1g00158 216 SMART serkin_6 4 178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g00158 216 Pfam Protein tyrosine and serine/threonine kinase 5 173 IPR001245 GO:0004672|GO:0006468
Pumo1g00158 216 SUPERFAMILY Protein kinase-like (PK-like) 2 173 IPR011009 -
Pumo1g00158 216 Pfam Domain of unknown function (DUF3403) 175 216 IPR021820 GO:0004674
Pumo1g00158 216 ProSitePatterns Serine/Threonine protein kinases active-site signature. 29 41 IPR008271 GO:0004672|GO:0006468
Pumo1g00158 216 Gene3D Transferase(Phosphotransferase) domain 1 1 179 - -
Pumo1g00158 216 ProSiteProfiles Protein kinase domain profile. 1 178 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00158 Pumo-Chr1 2590561 2591375 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00158 1 196 Receptor kinase-like Gene Family AT3G45860 53.431 8.61e-72 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo1g00158 PK_Tyr_Ser-Thr 1.8e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00158 - - gmx:100807858 368.237