Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00157 ATGGCTTTCTGCAACAGAATACTATGCTTCATCACTTTCACTTGTCTCCTGCACATAACAAAGCCTTCAAACTTGAACGGTGACACGTTATTCCAAGGTCATAAGCTCACAATAACCAACTCTTTGATCTGTTCTTCAGGTTTGTTCACACTGAGTTTCTTTCAGTTTGATGACTCTGAAGATTTCTACCTTGGAATTAGACTCTCAGCTGATAATTCTAGTTATTACTGGGTTGCCAATAGAGACAAGCCAATCCGTGACCCTGCAGGGGTTCTCACAATCGATGAATATGGTAACTTGAAAATTATTTCCAACGGGGGAAATTCCACTATCATGCTCTATTCTTCTTCTCAAGCTCAAAGCAATAGCAACAGTATTAGTGCCATCTTGCAAGAAAATGGCAACTTTGTGCTTCGTGAAATGAACCAAGATGGATCTGTGAAGAGGATATTGTGGCAAAGTTTTGATTATCCTACAAGCACAATTATACCAGGGATGAAGCTTGGGTTTGACAGAAAAAGGGGCCACAATTGGTCTATAACATCATGGAGAAGTGATAAGTCTCCTTTGTCAGGGTCCTTCAGCCTTGGCCTTGACCCCAAAACGAAGCAATTGGTGATGTGGTGGAGAGGGAAGATTGTTTGGAGTAGTGGCCAATGGAACAATGGAAGATTTGGCAATTTAAACTCGTCACCTTTTGAGAAGGACTTTGTTTTCGAGTACGTCTCAGATGAAAATGTAACGTACGTGAAGTATGTGCCTGTTTTTGGTTATATCATTATGGGATCTTTGGGTACAATATATGGTAGCAGTGGTGCCTCTTATTCATGCATTGATAAGTACTTTCTTTATGGTTGTTCAATGCCAAGTCCACCCAAATGCAGGGACGTTGATAGTTTGTACTTGGGCAGTGAGAGTAGCTATGGGGTAATGTCAGGGAAGGGGTTCATATTTGATGAAAAAAGGGAGAACCTGAGCCATTTTGATTGCTGGATGAAGTGCTTGAATAATTGCTCTTGTGAGGCCTACTCTTATGTAAATGAGGATGCAACTGGTTGCGAGATATGGAGCAAGGGCACGGCAAACTTTTCGGCCACTAATAATTGGATAACTGGTGGGCGTCAAATTTACTTCATTCGCAATGGAAAAGGCAAGACAACTAGGATATGGATCATAAGCGCCATAGTAGGAGCTCTTCTAATAATTTCATGCTTCACGTGCATTAAGTTATGGAGAAAACTCAAAGAAAGAGCTGAAAAGCGTAAGAAGCGAAATAATCTATTATCTGATATAGGAAGAAATACTGCCATTTCCGTTGCATACGATGAAAGAAGAGAACAGAGGAAAGATGGAAAGACAAGTGATGAAACATATATATTCGACTTTCAAACTATTCTTGAAGCAACTGCTAATTTTTCTTCCACCAATAAGATAGGGGAGGGAGGTTTTGGACCTGTCTACAAGGGGAAGCTGCCAAATGGACAAGAAATTGCTATAAAGAGACTATCCAAAAGTTCAGGACAGGGATTGATTGAGTTCAAAAATGAAGCAATGCTAATTGTCAAACTTCAGCACACTAATCTAGTGAGGCTTCTTGGTTTTTGCATAGACAGAGAAGAAAGAATATTAGTTTATGAGTTTATGCCCAACAAAAGCTTGAACTTATATCTCTTTGATTCCAACAAGAGAAACATGTTAGAATGGAAGATACGTTGTCAAATTGTTGAAGGAGTTGCACAAGGACTTGTATATTTACATCAATATTCAAGGTTGAAGGTGATACACAGAGACTTGAAAGCTAGCAACATTTTATTGGACAGTGAGTTGAATCCAAAAATATCAGATTTTGGAACTGCTAGAATATTTGAACTCACAGAATCTGAAGAACAAACAAACAGAATTGTTGGGACATTCGGCTATATGTCTCCAGAGTATGCTATGATGGGTATTGTTTCAACTAAAACTGATGTCTATAGTTTTGGTGTCCTACTACTAGAGATAGTGAGTGGAAAGAAAAATAGCGATGATTACCCACTCAATCTTGTTGTTTATGCATGGAAATTATGGAACGAAGGTGAAGCTCTACAGCTAATGGACACAATGTTGGATGGGTCATGCTCTCCCATCCAAGTGTTACGGTACATTCATATAGGTCTCTTGTGCACTCAAGATCAAGCAAGAGAGAGGCCCACTATGGTTGAAGTTGTTTCTTTTCTATCAAATGAAATTGCTGAATTACCTTTACCTAAGCAACCAGGATTTTGTAGCACTGAATCCATGGAAGAGATAGAGCAGCCTAAAAGTTGTTCAAATGAGATAACAATGTCATTGACATCAGGTAGATAA 2346 0.3917 MAFCNRILCFITFTCLLHITKPSNLNGDTLFQGHKLTITNSLICSSGLFTLSFFQFDDSEDFYLGIRLSADNSSYYWVANRDKPIRDPAGVLTIDEYGNLKIISNGGNSTIMLYSSSQAQSNSNSISAILQENGNFVLREMNQDGSVKRILWQSFDYPTSTIIPGMKLGFDRKRGHNWSITSWRSDKSPLSGSFSLGLDPKTKQLVMWWRGKIVWSSGQWNNGRFGNLNSSPFEKDFVFEYVSDENVTYVKYVPVFGYIIMGSLGTIYGSSGASYSCIDKYFLYGCSMPSPPKCRDVDSLYLGSESSYGVMSGKGFIFDEKRENLSHFDCWMKCLNNCSCEAYSYVNEDATGCEIWSKGTANFSATNNWITGGRQIYFIRNGKGKTTRIWIISAIVGALLIISCFTCIKLWRKLKERAEKRKKRNNLLSDIGRNTAISVAYDERREQRKDGKTSDETYIFDFQTILEATANFSSTNKIGEGGFGPVYKGKLPNGQEIAIKRLSKSSGQGLIEFKNEAMLIVKLQHTNLVRLLGFCIDREERILVYEFMPNKSLNLYLFDSNKRNMLEWKIRCQIVEGVAQGLVYLHQYSRLKVIHRDLKASNILLDSELNPKISDFGTARIFELTESEEQTNRIVGTFGYMSPEYAMMGIVSTKTDVYSFGVLLLEIVSGKKNSDDYPLNLVVYAWKLWNEGEALQLMDTMLDGSCSPIQVLRYIHIGLLCTQDQARERPTMVEVVSFLSNEIAELPLPKQPGFCSTESMEEIEQPKSCSNEITMSLTSGR 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00157 781 SUPERFAMILY Protein kinase-like (PK-like) 454 761 IPR011009 -
Pumo1g00157 781 SMART blect_4 27 158 IPR001480 -
Pumo1g00157 781 ProSiteProfiles PAN/Apple domain profile. 294 382 IPR003609 -
Pumo1g00157 781 ProSitePatterns Serine/Threonine protein kinases active-site signature. 593 605 IPR008271 GO:0004672|GO:0006468
Pumo1g00157 781 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 548 747 - -
Pumo1g00157 781 Pfam PAN-like domain 325 359 IPR003609 -
Pumo1g00157 781 PIRSF SRK 270 781 IPR024171 GO:0004674
Pumo1g00157 781 PIRSF SRK 1 265 IPR024171 GO:0004674
Pumo1g00157 781 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 123 758 - -
Pumo1g00157 781 Pfam Domain of unknown function (DUF3403) 741 781 IPR021820 GO:0004674
Pumo1g00157 781 Pfam D-mannose binding lectin 76 184 IPR001480 -
Pumo1g00157 781 CDD STKc_IRAK 478 739 - -
Pumo1g00157 781 Gene3D - 23 155 IPR036426 -
Pumo1g00157 781 ProSiteProfiles Protein kinase domain profile. 472 739 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g00157 781 SMART ntp_6 303 381 IPR003609 -
Pumo1g00157 781 Gene3D Phosphorylase Kinase; domain 1 434 547 - -
Pumo1g00157 781 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 187 IPR036426 -
Pumo1g00157 781 CDD B_lectin 36 158 IPR001480 -
Pumo1g00157 781 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 437 547 - -
Pumo1g00157 781 Gene3D Transferase(Phosphotransferase) domain 1 548 746 - -
Pumo1g00157 781 Pfam Protein tyrosine and serine/threonine kinase 475 739 IPR001245 GO:0004672|GO:0006468
Pumo1g00157 781 SMART serkin_6 472 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g00157 781 ProSiteProfiles Bulb-type lectin domain profile. 27 151 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00157 Pumo-Chr1 2582621 2585848 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00157 443 754 Receptor kinase-like Gene Family AT4G23250 56.782 2.97e-121 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo1g00157 PK_Tyr_Ser-Thr 6.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00157 - - gsj:114396075 1347.41