Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00123 ATGTCCACTCTGAGAGTTCAAGTTTCGGCTTGTGCCACCGTCAGCCACCTTCGCTTTCGCCCAAACGCCGTCGTTTCCTTCAGGAAGAAGCCTCTCACTCTTAGAGTGGTCTCAATGTCTTCCGTTCCTCCTTCCCAACCCTTCGAAATCGCCGTTAAAGCTTCCGTCACCACACCCAACAGGCTCGGCGACTGCCCTTTTTGCCAAAGGGTGTTGCTGACACTCGAGGAAAAACATCTACCTTATGAGCCCAAGTTGGTGGATTTGACCAACAAGCCAGAATGGTTTCATAAAGTCAATCCTGATGGTAAAGTTCCTGTCATAAAGTTTGATGAGAAGTGGGTTCCTGATTCAGATGTTATTACTCAAACATTGGAAGAGAAGTATCCCAGCCCACCATTGGTGACCCCACCTGAAAAGGCCACAGCGGGGTCAAAGATCTTTTCAACATTTATTGGATTTCTCAAGAGCAAGGATCCCAATGATGGAACAGAGCAAGCATTACTTAGTGAACTGAGCTCTTTCAATGATTACATCAAGGAAAATGGTCCTTTCATCAACGGTAATGAGATATCTGCAGCAGACCTATCACTTGGACCAAAGCTATACCATTTGGAGATTGTTTTGGGGCATTATAAGAAATGGACAGTGCCTGATTCACTTACCTCTTTGAAGTCTTATATGAAGGCCATTTTCTCGAGGGAATCGTTCGTTAAAACAAGTGCACAACCACAGGATGTCATTGAAGGTTGGCGCCCTAAAGTGGAAGGCTAA 774 0.4548 MSTLRVQVSACATVSHLRFRPNAVVSFRKKPLTLRVVSMSSVPPSQPFEIAVKASVTTPNRLGDCPFCQRVLLTLEEKHLPYEPKLVDLTNKPEWFHKVNPDGKVPVIKFDEKWVPDSDVITQTLEEKYPSPPLVTPPEKATAGSKIFSTFIGFLKSKDPNDGTEQALLSELSSFNDYIKENGPFINGNEISAADLSLGPKLYHLEIVLGHYKKWTVPDSLTSLKSYMKAIFSRESFVKTSAQPQDVIEGWRPKVEG 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00123 257 SFLD Main (cytGST) 64 232 - -
Pumo1g00123 257 Gene3D - 135 257 - -
Pumo1g00123 257 FunFam Glutathione S-transferase DHAR3 chloroplastic 46 134 - -
Pumo1g00123 257 Pfam Glutathione S-transferase, N-terminal domain 64 133 IPR004045 -
Pumo1g00123 257 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 47 254 IPR044627 GO:0033355|GO:0045174|GO:0098869
Pumo1g00123 257 FunFam Glutathione S-transferase DHAR3, chloroplastic 135 257 - -
Pumo1g00123 257 SUPERFAMILY Thioredoxin-like 64 131 IPR036249 -
Pumo1g00123 257 CDD GST_N_family 65 126 - -
Pumo1g00123 257 SUPERFAMILY GST C-terminal domain-like 128 254 IPR036282 -
Pumo1g00123 257 SFLD Glutathione Transferase (cytosolic) 64 232 IPR040079 -
Pumo1g00123 257 Gene3D Glutaredoxin 47 134 - -
Pumo1g00123 257 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 55 133 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00123 Pumo-Chr1 2149017 2154850 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00123 35 257 Glutathione S-transferase Gene Family AT5G16710 72.646 7.97e-125 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00123 K21888 - gmx:732557 489.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00123 1 2149017 2154850 Pumo1g00123 1 2149017 2154850 ECH